RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 ASB12Q8WXK4 309 aa17.7■□□□□ 0.42
VIM-201ENST00000224237 MARK4Q96L34 752 aa17.7■□□□□ 0.42
VIM-201ENST00000224237 CCDC138Q96M89 665 aa17.7■□□□□ 0.42
VIM-201ENST00000224237 MIPEPQ99797 713 aa17.7■□□□□ 0.42
VIM-201ENST00000224237 POLG2Q9UHN1 485 aa17.7■□□□□ 0.42
VIM-201ENST00000224237 OR1A2Q9Y585 309 aa17.7■□□□□ 0.42
VIM-201ENST00000224237 KLHL33A6NCF5 533 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 LOC730098B7Z3J9 87 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 THRAP10827 490 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 COX4I1P13073 169 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 HGFP14210 728 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 EZRP15311 586 aaKnown RBP17.69■□□□□ 0.42
VIM-201ENST00000224237 HMOX2P30519 316 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 RPA4Q13156 261 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 NFE2L1Q14494 772 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 PTCHD3Q3KNS1 767 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 PLA2G4EQ3MJ16 856 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 XKR5Q6UX68 686 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 OXR1Q8N573 874 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 FBXO15Q8NCQ5 510 aaPredicted RBP17.69■□□□□ 0.42
VIM-201ENST00000224237 RBM15BQ8NDT2 890 aaKnown RBP17.69■□□□□ 0.42
VIM-201ENST00000224237 FLCNQ8NFG4 579 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 RP9Q8TA86 221 aaKnown RBP17.69■□□□□ 0.42
VIM-201ENST00000224237 FOXJ1Q92949 421 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 UTP4Q969X6 686 aaKnown RBP17.69■□□□□ 0.42
VIM-201ENST00000224237 TUBGCP3Q96CW5 907 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 TRPS1Q9UHF7 1281 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 DUSP12Q9UNI6 340 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 MGRN1O60291 552 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 WDR47O94967 919 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 ATP4BP51164 291 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 MXRA7P84157 204 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 HERC3Q15034 1050 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 ZXDCQ2QGD7 858 aaPredicted RBP17.69■□□□□ 0.42
VIM-201ENST00000224237 DNAL1Q4LDG9 190 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 TMEM31Q5JXX7 168 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 ZNF852Q6ZMS4 543 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 CADM1Q9BY67 442 aaKnown RBP17.69■□□□□ 0.42
VIM-201ENST00000224237 RIC8BQ9NVN3 520 aa17.69■□□□□ 0.42
VIM-201ENST00000224237 PCYT1BQ9Y5K3 369 aaPredicted RBP17.69■□□□□ 0.42
VIM-201ENST00000224237 LOC100653049A0A140TA62 436 aa17.68■□□□□ 0.42
VIM-201ENST00000224237 KMOO15229 486 aa17.68■□□□□ 0.42
VIM-201ENST00000224237 GSC2O15499 205 aa17.68■□□□□ 0.42
VIM-201ENST00000224237 KRT34O76011 436 aa17.68■□□□□ 0.42
VIM-201ENST00000224237 C1orf105O95561 183 aa17.68■□□□□ 0.42
VIM-201ENST00000224237 LBPP18428 481 aa17.68■□□□□ 0.42
VIM-201ENST00000224237 GABRG2P18507 467 aa17.68■□□□□ 0.42
VIM-201ENST00000224237 MAT2AP31153 395 aaKnown RBP17.68■□□□□ 0.42
VIM-201ENST00000224237 IGFALSP35858 605 aa17.68■□□□□ 0.42
VIM-201ENST00000224237 BDKRB1P46663 353 aa17.68■□□□□ 0.42
VIM-201ENST00000224237 PPP2CBP62714 309 aa17.68■□□□□ 0.42
VIM-201ENST00000224237 PPP2CAP67775 309 aa17.68■□□□□ 0.42
VIM-201ENST00000224237 IRX1P78414 480 aaPredicted RBP17.68■□□□□ 0.42
VIM-201ENST00000224237 ELF3P78545 371 aaPredicted RBP17.68■□□□□ 0.42
VIM-201ENST00000224237 LONP2Q86WA8 852 aa17.68■□□□□ 0.42
VIM-201ENST00000224237 PARP9Q8IXQ6 854 aa17.68■□□□□ 0.42
VIM-201ENST00000224237 DNAJC11Q9NVH1 559 aa17.68■□□□□ 0.42
VIM-201ENST00000224237 PRKAB1Q9Y478 270 aa17.68■□□□□ 0.42
VIM-201ENST00000224237 CLDN9O95484 217 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 PRR35P0CG20 571 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 TPMTP51580 245 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 STX1BP61266 288 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 CYLC2Q14093 348 aaPredicted RBP17.67■□□□□ 0.42
VIM-201ENST00000224237 PUS10Q3MIT2 529 aaKnown RBP17.67■□□□□ 0.42
VIM-201ENST00000224237 TCHHL1Q5QJ38 904 aaPredicted RBP17.67■□□□□ 0.42
VIM-201ENST00000224237 OGFOD2Q6N063 350 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 RNF165Q6ZSG1 346 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 ARHGAP24Q8N264 748 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 SNX31Q8N9S9 440 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 MCUR1Q96AQ8 359 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 PYCR2Q96C36 320 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 BTBD1Q9H0C5 482 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 ATG10Q9H0Y0 220 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 POLMQ9NP87 494 aaPredicted RBP17.67■□□□□ 0.42
VIM-201ENST00000224237 STOX2Q9P2F5 926 aaPredicted RBP17.67■□□□□ 0.42
VIM-201ENST00000224237 SLC22A14Q9Y267 594 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 KRT87PA6NCN2 255 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 ALDOCP09972 364 aaKnown RBP17.67■□□□□ 0.42
VIM-201ENST00000224237 EPORP19235 508 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 GGTA1PQ4G0N0 100 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 IL27RAQ6UWB1 636 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 UNC5DQ6UXZ4 953 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 TRIM69Q86WT6 500 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 DENND6BQ8NEG7 585 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 FBXO27Q8NI29 283 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 MAGEC3Q8TD91 643 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 MAGEB10Q96LZ2 347 aaPredicted RBP17.67■□□□□ 0.42
VIM-201ENST00000224237 RTKNQ9BST9 563 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 OR52A5Q9H2C5 316 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 MMADHCQ9H3L0 296 aaPredicted RBP17.67■□□□□ 0.42
VIM-201ENST00000224237 ACTR8Q9H981 624 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 RMI1Q9H9A7 625 aa17.67■□□□□ 0.42
VIM-201ENST00000224237 LRRC72A6NJI9 287 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 MEI4A8MW99 385 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 CACNB4O00305 520 aaPredicted RBP17.66■□□□□ 0.42
VIM-201ENST00000224237 SLC31A1O15431 190 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 CHRNB1P11230 501 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 ACADLP28330 430 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 ACSL1P33121 698 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 PFN3P60673 137 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms