RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 PRNPP04156 253 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 EPORP19235 508 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 SLC6A11P48066 632 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 ZXDCQ2QGD7 858 aaPredicted RBP17.73■□□□□ 0.43
SMPD3-211ENST00000568373 GAB4Q2WGN9 574 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 SPATS1Q496A3 300 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 TIGD2Q4W5G0 525 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 PAGE3Q5JUK9 113 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 LDLRAP1Q5SW96 308 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 BEND7Q8N7W2 519 aaPredicted RBP17.73■□□□□ 0.43
SMPD3-211ENST00000568373 ASZ1Q8WWH4 475 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 PKP2Q99959 881 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 ACTL8Q9H568 366 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 SFXN1Q9H9B4 322 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 FARSBQ9NSD9 589 aaKnown RBP17.73■□□□□ 0.43
SMPD3-211ENST00000568373 GMPR2Q9P2T1 348 aaKnown RBP17.73■□□□□ 0.43
SMPD3-211ENST00000568373 DEC1Q9P2X7 70 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 ITM2BQ9Y287 266 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 DTNAQ9Y4J8 743 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 POLR3HQ9Y535 204 aaPredicted RBP17.73■□□□□ 0.43
SMPD3-211ENST00000568373 PCDHA9Q9Y5H5 950 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 ATG2AQ2TAZ0 1938 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 OTOL1A6NHN0 477 aaPredicted RBP17.73■□□□□ 0.43
SMPD3-211ENST00000568373 OR2AG2A6NM03 316 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 PSMD11O00231 422 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 MANBAO00462 879 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 CLDN9O95484 217 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 CYP2A7P20853 494 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 NRIP1P48552 1158 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 ACOX1Q15067 660 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 DUSP6Q16828 381 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 SMU1Q2TAY7 513 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 C9orf50Q5SZB4 431 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 ZNF648Q5T619 568 aaPredicted RBP17.73■□□□□ 0.43
SMPD3-211ENST00000568373 CYP2R1Q6VVX0 501 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 NRSN1Q8IZ57 195 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 FGF13Q92913 245 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 USP7Q93009 1102 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 GLYATL1Q969I3 302 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 AP2M1Q96CW1 435 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 DUS3LQ96G46 650 aaKnown RBP17.73■□□□□ 0.43
SMPD3-211ENST00000568373 P2RY13Q9BPV8 354 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 ZNF490Q9ULM2 529 aaPredicted RBP17.73■□□□□ 0.43
SMPD3-211ENST00000568373 AP4S1Q9Y587 144 aa17.73■□□□□ 0.43
SMPD3-211ENST00000568373 TCF20Q9UGU0 1960 aaKnown RBP17.72■□□□□ 0.43
SMPD3-211ENST00000568373 ANKRD28O15084 1053 aa17.72■□□□□ 0.43
SMPD3-211ENST00000568373 RNASEH2AO75792 299 aaKnown RBP17.72■□□□□ 0.43
SMPD3-211ENST00000568373 SLCO2B1O94956 709 aa17.72■□□□□ 0.43
SMPD3-211ENST00000568373 SLC2A4P14672 509 aa17.72■□□□□ 0.43
SMPD3-211ENST00000568373 SLC6A12P48065 614 aa17.72■□□□□ 0.43
SMPD3-211ENST00000568373 AP1S2P56377 157 aa17.72■□□□□ 0.43
SMPD3-211ENST00000568373 RPL38P63173 70 aaKnown RBP17.72■□□□□ 0.43
SMPD3-211ENST00000568373 YBX1P67809 324 aaKnown RBP17.72■□□□□ 0.43
SMPD3-211ENST00000568373 BNIP2Q12982 314 aa17.72■□□□□ 0.43
SMPD3-211ENST00000568373 FNDC3BQ53EP0 1204 aaKnown RBP17.72■□□□□ 0.43
SMPD3-211ENST00000568373 HABP4Q5JVS0 413 aaKnown RBP17.72■□□□□ 0.43
SMPD3-211ENST00000568373 TMEM125Q96AQ2 219 aa17.72■□□□□ 0.43
SMPD3-211ENST00000568373 NR1H4Q96RI1 486 aaPredicted RBP17.72■□□□□ 0.43
SMPD3-211ENST00000568373 FAM83CQ9BQN1 747 aa17.72■□□□□ 0.43
SMPD3-211ENST00000568373 ACTR8Q9H981 624 aa17.72■□□□□ 0.43
SMPD3-211ENST00000568373 CERS4Q9HA82 394 aa17.72■□□□□ 0.43
SMPD3-211ENST00000568373 GRXCR2A6NFK2 248 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 WNT9AO14904 365 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 NPPAP01160 153 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 JAK1P23458 1154 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 FSHRP23945 695 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 MAD2L1Q13257 205 aaPredicted RBP17.71■□□□□ 0.43
SMPD3-211ENST00000568373 HNRNPA1L2Q32P51 320 aaKnown RBP17.71■□□□□ 0.43
SMPD3-211ENST00000568373 RASGRP3Q8IV61 690 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 RAVER1Q8IY67 606 aaKnown RBP17.71■□□□□ 0.43
SMPD3-211ENST00000568373 ICA1LQ8NDH6 482 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 CATSPER1Q8NEC5 780 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 ADCY4Q8NFM4 1077 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 VN1R2Q8NFZ6 395 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 MCOLN3Q8TDD5 553 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 GATA6Q92908 595 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 ZUFSPQ96AP4 578 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 WRAP53Q9BUR4 548 aaKnown RBP17.71■□□□□ 0.43
SMPD3-211ENST00000568373 EDDM13A0A1B0GTR0 161 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 HEPACAM2A8MVW5 462 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 H0Y858 1186 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 SPINT1O43278 529 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 KRT6AP02538 564 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 KRT6BP04259 564 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 CAPNS1P04632 268 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 HLA-EP13747 358 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 ITGB7P26010 798 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 SLC7A1P30825 629 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 CASP2P42575 452 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 KRT6CP48668 564 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 METAP1P53582 386 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 HMGCS1Q01581 520 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 EIF4HQ15056 248 aaKnown RBP17.71■□□□□ 0.43
SMPD3-211ENST00000568373 IMPG1Q17R60 797 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 PTCHD3Q3KNS1 767 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 GGTA1PQ4G0N0 100 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 SGO1Q5FBB7 561 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 C9orf64Q5T6V5 341 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 DPP10Q8N608 796 aa17.71■□□□□ 0.43
SMPD3-211ENST00000568373 RASGEF1AQ8N9B8 481 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms