RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 PROSER1Q86XN7 944 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 IGLON5A6NGN9 336 aa17.02■□□□□ 0.31
PTPN21-208ENST00000556564 FAM25AB3EWG3 89 aa17.02■□□□□ 0.31
PTPN21-208ENST00000556564 FAM25CB3EWG5 89 aa17.02■□□□□ 0.31
PTPN21-208ENST00000556564 FAM25GB3EWG6 89 aa17.02■□□□□ 0.31
PTPN21-208ENST00000556564 UGT2B17O75795 530 aa17.02■□□□□ 0.31
PTPN21-208ENST00000556564 HYAL2Q12891 473 aa17.02■□□□□ 0.31
PTPN21-208ENST00000556564 TMEM115Q12893 351 aaPredicted RBP17.02■□□□□ 0.31
PTPN21-208ENST00000556564 C1orf61Q13536 156 aa17.02■□□□□ 0.31
PTPN21-208ENST00000556564 HEPACAMQ14CZ8 416 aa17.02■□□□□ 0.31
PTPN21-208ENST00000556564 A0A1W2PQU0 124 aa17.02■□□□□ 0.31
PTPN21-208ENST00000556564 SRPRAP08240 638 aaKnown RBP17.02■□□□□ 0.31
PTPN21-208ENST00000556564 FAM58BPP0C7Q3 252 aa17.02■□□□□ 0.31
PTPN21-208ENST00000556564 MAGEA10P43363 369 aaPredicted RBP17.02■□□□□ 0.31
PTPN21-208ENST00000556564 HNMTP50135 292 aa17.02■□□□□ 0.31
PTPN21-208ENST00000556564 GLIS1Q8NBF1 620 aa17.02■□□□□ 0.31
PTPN21-208ENST00000556564 OR2T12Q8NG77 320 aa17.02■□□□□ 0.31
PTPN21-208ENST00000556564 DLG3Q92796 817 aa17.02■□□□□ 0.31
PTPN21-208ENST00000556564 NLE1Q9NVX2 485 aaPredicted RBP17.02■□□□□ 0.31
PTPN21-208ENST00000556564 RFXAPO00287 272 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 NCBP2P52298 156 aaKnown RBP eCLIP17.01■□□□□ 0.31
PTPN21-208ENST00000556564 MRPL28Q13084 256 aaKnown RBP17.01■□□□□ 0.31
PTPN21-208ENST00000556564 LARS2Q15031 903 aaKnown RBP17.01■□□□□ 0.31
PTPN21-208ENST00000556564 PAOXQ6QHF9 649 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 ZMIZ2Q8NF64 920 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 BBIP1A8MTZ0 92 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 KLHL12Q53G59 568 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 TOR1AIP1Q5JTV8 583 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 RBM20Q5T481 1227 aaKnown RBP17.01■□□□□ 0.31
PTPN21-208ENST00000556564 THOC6Q86W42 341 aaKnown RBP17.01■□□□□ 0.31
PTPN21-208ENST00000556564 ZDHHC7Q9NXF8 308 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 DGKBQ9Y6T7 804 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 ELOCQ15369 112 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 C15orf39Q6ZRI6 1047 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 C3orf58Q8NDZ4 430 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 TEX47Q8TBZ9 253 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 SCAMP4Q969E2 229 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 DTNBP1Q96EV8 351 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 SLC38A2Q96QD8 506 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 HCN3Q9P1Z3 774 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 PDPK1O15530 556 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 MYOGP15173 224 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 NTSR1P30989 418 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 CASP9P55211 416 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.01■□□□□ 0.31
PTPN21-208ENST00000556564 AP1ARQ63HQ0 302 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 FAM220AQ7Z4H9 259 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 NET1Q7Z628 596 aaPredicted RBP17.01■□□□□ 0.31
PTPN21-208ENST00000556564 SLCO3A1Q9UIG8 710 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 UBXN7O94888 489 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 PSMG1O95456 288 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 RALGDSQ12967 914 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 NEDD8Q15843 81 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 QPCTQ16769 361 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 REP15Q6BDI9 236 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 HEATR4Q86WZ0 1026 aa17.01■□□□□ 0.31
PTPN21-208ENST00000556564 AFF1P51825 1210 aaKnown RBP17■□□□□ 0.31
PTPN21-208ENST00000556564 FAM43BQ6ZT52 329 aaPredicted RBP17■□□□□ 0.31
PTPN21-208ENST00000556564 POLR2CP19387 275 aaPredicted RBP17■□□□□ 0.31
PTPN21-208ENST00000556564 PRR5P85299 388 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 RPLP0P6Q8NHW5 317 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 RNF31Q96EP0 1072 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 GATA5Q9BWX5 397 aaPredicted RBP17■□□□□ 0.31
PTPN21-208ENST00000556564 C1orf109Q9NX04 203 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 IKZF3Q9UKT9 509 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 MID1O15344 667 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 PCDH7O60245 1069 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 RYKP34925 604 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 GJA8P48165 433 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 SUSD1Q6UWL2 747 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 TSACCQ96A04 125 aaPredicted RBP17■□□□□ 0.31
PTPN21-208ENST00000556564 GPR34Q9UPC5 381 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 ERI3O43414 337 aaKnown RBP17■□□□□ 0.31
PTPN21-208ENST00000556564 SOCS5O75159 536 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 SIX3O95343 332 aaPredicted RBP17■□□□□ 0.31
PTPN21-208ENST00000556564 KLF10Q13118 480 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 CST6Q15828 149 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 RAB6CQ53S08 254 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 ARHGAP40Q5TG30 622 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 CDC73Q6P1J9 531 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 FAM180AQ6UWF9 173 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 SMPDL3BQ92485 455 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 RAB6CQ9H0N0 254 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 TPRKBQ9Y3C4 175 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 CDC7O00311 574 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 AHSGP02765 367 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 TPP2P29144 1249 aaPredicted RBP17■□□□□ 0.31
PTPN21-208ENST00000556564 ZDHHC24Q6UX98 284 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 TCEAL8Q8IYN2 117 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 KLHDC9Q8NEP7 349 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 RTKNQ9BST9 563 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 LMAN1LQ9HAT1 526 aa17■□□□□ 0.31
PTPN21-208ENST00000556564 CYP4B1P13584 511 aa16.99■□□□□ 0.31
PTPN21-208ENST00000556564 ZNF37AP17032 561 aaPredicted RBP16.99■□□□□ 0.31
PTPN21-208ENST00000556564 FECHP22830 423 aa16.99■□□□□ 0.31
PTPN21-208ENST00000556564 TAS2R50P59544 299 aa16.99■□□□□ 0.31
PTPN21-208ENST00000556564 METTL27Q8N6F8 245 aaPredicted RBP16.99■□□□□ 0.31
PTPN21-208ENST00000556564 TTLQ8NG68 377 aa16.99■□□□□ 0.31
PTPN21-208ENST00000556564 ZNF354BQ96LW1 612 aa16.99■□□□□ 0.31
PTPN21-208ENST00000556564 ITM2CQ9NQX7 267 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms