RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 ADAMTS20P59510 1910 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 IGHV5-51A0A0C4DH38 117 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 TLCD2A6NGC4 264 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 EFCAB8A8MWE9 144 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 STMND1H3BQB6 276 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 BTN3A1O00481 513 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 ESR1P03372 595 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 CD82P27701 267 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 AOAHP28039 575 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 KPNA2P52292 529 aaKnown RBP11.49□□□□□ -0.57
RAB5C-204ENST00000547517 MPP1Q00013 466 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 MC2RQ01718 297 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 CTBP1Q13363 440 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 KCNAB1Q14722 419 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 HIF1AQ16665 826 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 ZNF789Q5FWF6 425 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 HP1BP3Q5SSJ5 553 aaPredicted RBP11.49□□□□□ -0.57
RAB5C-204ENST00000547517 HIBCHQ6NVY1 386 aaPredicted RBP11.49□□□□□ -0.57
RAB5C-204ENST00000547517 OTOAQ7RTW8 1153 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 KCNMB4Q86W47 210 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 AMIGO1Q86WK6 493 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 TBC1D21Q8IYX1 336 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 UNC5BQ8IZJ1 945 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 PDIK1LQ8N165 341 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 OR5K2Q8NHB8 316 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 CFAP61Q8NHU2 1237 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 GSDMBQ8TAX9 411 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 SKA2Q8WVK7 121 aaPredicted RBP11.49□□□□□ -0.57
RAB5C-204ENST00000547517 UBXN4Q92575 508 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 RNF31Q96EP0 1072 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 CFAP36Q96G28 342 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 PPM1MQ96MI6 270 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 BIRC8Q96P09 236 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 OR6C1Q96RD1 312 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 TCF12Q99081 682 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 CD180Q99467 661 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 FAM167BQ9BTA0 163 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 ASPSCR1Q9BZE9 553 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 INTS10Q9NVR2 710 aaKnown RBP11.49□□□□□ -0.57
RAB5C-204ENST00000547517 POMT2Q9UKY4 750 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 ICKQ9UPZ9 632 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 CHMP2BQ9UQN3 213 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 VPS9D1Q9Y2B5 631 aa11.49□□□□□ -0.57
RAB5C-204ENST00000547517 DSPP15924 2871 aaKnown RBP11.49□□□□□ -0.57
RAB5C-204ENST00000547517 E5RI56 91 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 H3BMM5 538 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 MATN2O00339 956 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 BTN3A3O00478 584 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 KPNA5O15131 536 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 POLR1CO15160 346 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-204ENST00000547517 RAD51CO43502 376 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 GPC4O75487 556 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 PKMP14618 531 aaKnown RBP11.48□□□□□ -0.57
RAB5C-204ENST00000547517 NELFEP18615 380 aaKnown RBP11.48□□□□□ -0.57
RAB5C-204ENST00000547517 SHMT2P34897 504 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 RPL21P46778 160 aaKnown RBP11.48□□□□□ -0.57
RAB5C-204ENST00000547517 ARL4DP49703 201 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 ADARP55265 1226 aaKnown RBP11.48□□□□□ -0.57
RAB5C-204ENST00000547517 ARL4CP56559 192 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 TMPRSS3P57727 454 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 CXADRP78310 365 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 ABRQ12979 859 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 SRSF6Q13247 344 aaKnown RBP11.48□□□□□ -0.57
RAB5C-204ENST00000547517 HSP90AA5PQ58FG0 334 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 SPANXN3Q5MJ09 141 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 FBXO38Q6PIJ6 1188 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 CEACAM20Q6UY09 585 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 VASH2Q86V25 355 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 IGDCC3Q8IVU1 814 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 SIDT2Q8NBJ9 832 aaKnown RBP11.48□□□□□ -0.57
RAB5C-204ENST00000547517 CALML6Q8TD86 181 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 KLHL6Q8WZ60 621 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 ELMO2Q96JJ3 720 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 TEFMQ96QE5 360 aaKnown RBP11.48□□□□□ -0.57
RAB5C-204ENST00000547517 EBNA1BP2Q99848 306 aaKnown RBP11.48□□□□□ -0.57
RAB5C-204ENST00000547517 WDR83Q9BRX9 315 aaKnown RBP11.48□□□□□ -0.57
RAB5C-204ENST00000547517 B3GNT4Q9C0J1 378 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 DPH5Q9H2P9 285 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 TFB2MQ9H5Q4 396 aaKnown RBP11.48□□□□□ -0.57
RAB5C-204ENST00000547517 CPNE5Q9HCH3 593 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 FBXO8Q9NRD0 319 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 IARS2Q9NSE4 1012 aaKnown RBP11.48□□□□□ -0.57
RAB5C-204ENST00000547517 SOHLH2Q9NX45 425 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 CIDEBQ9UHD4 219 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 POLG2Q9UHN1 485 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 RALYQ9UKM9 306 aaKnown RBP11.48□□□□□ -0.57
RAB5C-204ENST00000547517 RUVBL2Q9Y230 463 aaKnown RBP11.48□□□□□ -0.57
RAB5C-204ENST00000547517 SNX24Q9Y343 169 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 PCDHB11Q9Y5F2 797 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 FAM169AQ9Y6X4 670 aa11.48□□□□□ -0.57
RAB5C-204ENST00000547517 FAM208BQ5VWN6 2430 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 FAM187AA6NFU0 413 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 C2orf74A8MZ97 194 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 SMAPO00193 183 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 SLCO2B1O94956 709 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 TTC4O95801 387 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 S1PR4O95977 384 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 RPN2P04844 631 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 EBLN1P0CF75 366 aa11.47□□□□□ -0.57
RAB5C-204ENST00000547517 ERVK-10P10266 1014 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms