RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 NPIPB11E5RHQ5 1161 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 IPO8O15397 1037 aaKnown RBP4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 PRPF4O43172 522 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 EXTL3O43909 919 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 TPPPO94811 219 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 NDUFB10O96000 172 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 GLUD1P00367 558 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 CHRNB1P11230 501 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 ST6GAL1P15907 406 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 CTPS1P17812 591 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 GPD1P21695 349 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 MUTP22033 750 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 HOXA6P31267 233 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 RYKP34925 604 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 ADRA1BP35368 520 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 KRT2P35908 639 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 ARSEP51690 589 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 EFNA5P52803 228 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 SNAP25P60880 206 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 TIMM10P62072 90 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 SLC18A2Q05940 514 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 PMPCAQ10713 525 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 ITGADQ13349 1161 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 SNTB1Q13884 538 aaKnown RBP4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 LSM12Q3MHD2 195 aaKnown RBP4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 DCAF6Q58WW2 860 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 TSTD2Q5T7W7 516 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 KIAA0930Q6ICG6 404 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 ZNF813Q6ZN06 617 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 TFAP2DQ7Z6R9 452 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 SERPINA11Q86U17 422 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 ARID3BQ8IVW6 561 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 OR8H3Q8N146 312 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 SLC39A11Q8N1S5 342 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 TMEM217Q8N7C4 229 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 IL17RCQ8NAC3 791 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 DEPDC1BQ8WUY9 529 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 DNASE1L2Q92874 299 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 ZNF503Q96F45 646 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 VCPIP1Q96JH7 1222 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 HGH1Q9BTY7 390 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 FRMD8Q9BZ67 464 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 CDT1Q9H211 546 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 TOR3AQ9H497 397 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 OSGIN1Q9UJX0 560 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 WNT6Q9Y6F9 365 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 EPN1Q9Y6I3 576 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 NOTCH1P46531 2555 aa4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 MYO5AQ9Y4I1 1855 aaKnown RBP4.71□□□□□ -1.66
HMGB1P23-201ENST00000518743 TRBC2A0A5B9 178 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 CXorf65A6NEN9 183 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 FAM90A8PA6NJQ4 464 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 RRHO14718 337 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 ZC3H11AO75152 810 aaKnown RBP eCLIP4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 JRKO75564 520 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 NKX2-2O95096 273 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 FAM90A13PP0C7W8 464 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 FAM90A24PP0C7X0 464 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 CTSAP10619 480 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 ZNF20P17024 532 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 IFNAR1P17181 557 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 CHATP28329 748 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 OAS2P29728 719 aaKnown RBP4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 RFC1P35251 1148 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 PRCPP42785 496 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 CACNA2D1P54289 1103 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 RAD23BP54727 409 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 UCNP55089 124 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 MRPS34P82930 218 aaKnown RBP4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 GFPT1Q06210 699 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 KLRC3Q07444 240 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 ALCAMQ13740 583 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 CXorf66Q5JRM2 361 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 KIAA1614Q5VZ46 1190 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 PMS2CLQ68D20 193 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 IQCA1Q86XH1 822 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 NAXDQ8IW45 347 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 CADM3Q8N126 398 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 MCPH1Q8NEM0 835 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 BEST2Q8NFU1 509 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 SETD6Q8TBK2 473 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 ZNF398Q8TD17 642 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 SETD7Q8WTS6 366 aaKnown RBP4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 NEU4Q8WWR8 484 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 FGF13Q92913 245 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 VPS33AQ96AX1 596 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 TMCO6Q96DC7 493 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 DYNLL2Q96FJ2 89 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 SPATA33Q96N06 139 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 DGAT2Q96PD7 388 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 CITED2Q99967 270 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 MACROD1Q9BQ69 325 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 MXRA8Q9BRK3 442 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 CCDC106Q9BWC9 280 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 NUF2Q9BZD4 464 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 FAM49AQ9H0Q0 323 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 MRGBPQ9NV56 204 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 SEL1LQ9UBV2 794 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 PADI3Q9ULW8 664 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms