RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 TGM2P21980 687 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 PBLDP30039 288 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 GRK5P34947 590 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 THBS4P35443 961 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 HOXD13P35453 343 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 PPP1R2P41236 205 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 PRCPP42785 496 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 MAGEA11P43364 429 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 RPL5P46777 297 aaKnown RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 PIP4K2AP48426 406 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 PCP4P48539 62 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 SULT1E1P49888 294 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 AGTR2P50052 363 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 CCR3P51677 355 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 AP2S1P53680 142 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 AP1S2P56377 157 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 NCALDP61601 193 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 IRX4P78413 519 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 OTUD4Q01804 1114 aaKnown RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 CDR2Q01850 454 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 CEBPZQ03701 1054 aaKnown RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 ASPHQ12797 758 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TRPC3Q13507 836 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 DMC1Q14565 340 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 EFTUD2Q15029 972 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 NCF4Q15080 339 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TAF12Q16514 161 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 UGP2Q16851 508 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 LRRC36Q1X8D7 754 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 EDRF1Q3B7T1 1238 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZC2HC1CQ53FD0 456 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 SETMARQ53H47 684 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 AWAT1Q58HT5 328 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 FBXO48Q5FWF7 155 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 EPHA10Q5JZY3 1008 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 C10orf25Q5T742 122 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 ATAD3BQ5T9A4 648 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 ANKRD40Q6AI12 368 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TBC1D3GQ6DHY5 549 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TBC1D3CQ6IPX1 549 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 PPP1R2P3Q6NXS1 205 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 SHC4Q6S5L8 630 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZYG11AQ6WRX3 759 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 SLC39A5Q6ZMH5 540 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 USP50Q70EL3 339 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 KRT74Q7RTS7 529 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 GSTA5Q7RTV2 222 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 PRUNE1Q86TP1 453 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 COMTD1Q86VU5 262 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TBC1D3Q8IZP1 549 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 CNTROBQ8N137 903 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 RIBC1Q8N443 379 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 NKAPQ8N5F7 415 aaKnown RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 PCYOX1LQ8NBM8 494 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 OR6C4Q8NGE1 309 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 LHFPL5Q8TAF8 219 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 SLC26A7Q8TE54 656 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 GANCQ8TET4 914 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 CHPT1Q8WUD6 406 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 VPS33AQ96AX1 596 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 B3GALT6Q96L58 329 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 C7orf26Q96N11 449 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 YME1L1Q96TA2 773 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 FERMT1Q9BQL6 677 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TRMOQ9BU70 441 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TMEM120AQ9BXJ8 343 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 LSG1Q9H089 658 aaKnown RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 DDX47Q9H0S4 455 aaKnown RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 THAP9Q9H5L6 903 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 ATP13A3Q9H7F0 1226 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 ECT2Q9H8V3 914 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 TRIM45Q9H8W5 580 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 KCNK13Q9HB14 408 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 NTN4Q9HB63 628 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 PPANQ9NQ55 473 aaKnown RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 NMRK1Q9NWW6 199 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 GMEB2Q9UKD1 530 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 BAG5Q9UL15 447 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 ARHGAP26Q9UNA1 814 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 WBP11Q9Y2W2 641 aaKnown RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 AFG3L2Q9Y4W6 797 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 CACNG2Q9Y698 323 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 RTL9Q8NET4 1388 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 PALLDQ8WX93 1383 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZMYM2Q9UBW7 1377 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 ATP10DQ9P241 1426 aa4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 FAM208AQ9UK61 1670 aaKnown RBP4.61□□□□□ -1.67
HMGB3P13-201ENST00000511263 NWD2Q9ULI1 1742 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 LOC100653049A0A140TA62 436 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 A0A1B0GWJ7 208 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 A0A1W2PQ67 120 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 ARHGEF35A5YM69 484 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 EFCAB10A6NFE3 127 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 MYMKA6NI61 221 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 SLC9B1P1A6NJY1 282 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 C16orf96A6NNT2 1141 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 FAM25AB3EWG3 89 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 FAM25CB3EWG5 89 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 FAM25GB3EWG6 89 aa4.6□□□□□ -1.67
HMGB3P13-201ENST00000511263 PRYO14603 147 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms