RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 VPS26AO75436 327 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 PRKACGP22612 351 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 TCEA1P23193 301 aaKnown RBP17.42■□□□□ 0.38
NUP54-205ENST00000507257 FMO4P31512 558 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 FMO3P31513 532 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 RPL9P32969 192 aaKnown RBP17.42■□□□□ 0.38
NUP54-205ENST00000507257 BMPR1AP36894 532 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 PPP3CCP48454 512 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 CLK3P49761 638 aaKnown RBP17.42■□□□□ 0.38
NUP54-205ENST00000507257 NEK2P51955 445 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 ZNF140P52738 457 aaPredicted RBP17.42■□□□□ 0.38
NUP54-205ENST00000507257 LSM3P62310 102 aaKnown RBP17.42■□□□□ 0.38
NUP54-205ENST00000507257 ADAM17P78536 824 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 SLC13A2Q13183 592 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 MAD2L1BPQ15013 274 aaPredicted RBP17.42■□□□□ 0.38
NUP54-205ENST00000507257 ALG1LQ6GMV1 187 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 IL27RAQ6UWB1 636 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 CYP4Z1Q86W10 505 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 ABI1Q8IZP0 508 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 OR6J1Q8NGC5 347 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 SLC39A13Q96H72 371 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 IKZF5Q9H5V7 419 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 ABCB10Q9NRK6 738 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 EXD2Q9NVH0 621 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 SLC25A37Q9NYZ2 338 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 SLCO3A1Q9UIG8 710 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 NLRC5Q86WI3 1866 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 UBA6A0AVT1 1052 aaPredicted RBP17.41■□□□□ 0.38
NUP54-205ENST00000507257 F2P00734 622 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 CAPN1P07384 714 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 CD36P16671 472 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 SMPD1P17405 629 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 RCVRNP35243 200 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 GZMMP51124 257 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 TRAF3Q13114 568 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 PROX2Q3B8N5 592 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 LAIR1Q6GTX8 287 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 SNX20Q7Z614 316 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 POC5Q8NA72 575 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 ZNF540Q8NDQ6 660 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 OR52B6Q8NGF0 335 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 LILRB4Q8NHJ6 448 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 PSMG2Q969U7 264 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 ZFP42Q96MM3 310 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 PITX2Q99697 317 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 ITPAQ9BY32 194 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 OR2B2Q9GZK3 357 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 EIF3LQ9Y262 564 aaKnown RBP17.41■□□□□ 0.38
NUP54-205ENST00000507257 INVSQ9Y283 1065 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 TLR6Q9Y2C9 796 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 COMMD10Q9Y6G5 202 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 MICAL3Q7RTP6 2002 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 MAN1A2O60476 641 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 ERN1O75460 977 aaKnown RBP17.41■□□□□ 0.38
NUP54-205ENST00000507257 NDUFS3O75489 264 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 SNAI1O95863 264 aaPredicted RBP17.41■□□□□ 0.38
NUP54-205ENST00000507257 ODC1P11926 461 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 PKMP14618 531 aaKnown RBP17.41■□□□□ 0.38
NUP54-205ENST00000507257 ETV6P41212 452 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 HTR6P50406 440 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 ARHGDIAP52565 204 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 IL2P60568 153 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 VAC14Q08AM6 782 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 FBXO48Q5FWF7 155 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 C6orf183Q5T699 404 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 CES5AQ6NT32 575 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 USP43Q70EL4 1123 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 SCD5Q86SK9 330 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 ELMOD1Q8N336 334 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 DNAJB3Q8WWF6 145 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 PROX1Q92786 737 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 SEMA3CQ99985 751 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 C1orf109Q9NX04 203 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 CD274Q9NZQ7 290 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 CCDC59Q9P031 241 aaKnown RBP17.41■□□□□ 0.38
NUP54-205ENST00000507257 GMPPBQ9Y5P6 360 aa17.41■□□□□ 0.38
NUP54-205ENST00000507257 PSMD11O00231 422 aa17.4■□□□□ 0.38
NUP54-205ENST00000507257 HAT1O14929 419 aa17.4■□□□□ 0.38
NUP54-205ENST00000507257 SEC22BO75396 215 aa17.4■□□□□ 0.38
NUP54-205ENST00000507257 THP07101 528 aa17.4■□□□□ 0.38
NUP54-205ENST00000507257 CLCN4P51793 760 aa17.4■□□□□ 0.38
NUP54-205ENST00000507257 CLCNKBP51801 687 aa17.4■□□□□ 0.38
NUP54-205ENST00000507257 EN1Q05925 392 aaPredicted RBP17.4■□□□□ 0.38
NUP54-205ENST00000507257 PTPRCAPQ14761 206 aa17.4■□□□□ 0.38
NUP54-205ENST00000507257 PARP15Q460N3 678 aa17.4■□□□□ 0.38
NUP54-205ENST00000507257 RFTN2Q52LD8 501 aaPredicted RBP17.4■□□□□ 0.38
NUP54-205ENST00000507257 LRIF1Q5T3J3 769 aa17.4■□□□□ 0.38
NUP54-205ENST00000507257 PGBD3Q8N328 593 aa17.4■□□□□ 0.38
NUP54-205ENST00000507257 AMER2Q8N7J2 671 aa17.4■□□□□ 0.38
NUP54-205ENST00000507257 C3orf58Q8NDZ4 430 aa17.4■□□□□ 0.38
NUP54-205ENST00000507257 SCAMP5Q8TAC9 235 aa17.4■□□□□ 0.38
NUP54-205ENST00000507257 GTF3C2Q8WUA4 911 aaPredicted RBP17.4■□□□□ 0.38
NUP54-205ENST00000507257 HTRA1Q92743 480 aa17.4■□□□□ 0.38
NUP54-205ENST00000507257 TRIB3Q96RU7 358 aa17.4■□□□□ 0.38
NUP54-205ENST00000507257 TP63Q9H3D4 680 aaPredicted RBP17.4■□□□□ 0.38
NUP54-205ENST00000507257 NEK6Q9HC98 313 aa17.4■□□□□ 0.38
NUP54-205ENST00000507257 EVLQ9UI08 416 aaPredicted RBP17.4■□□□□ 0.38
NUP54-205ENST00000507257 TRMT6Q9UJA5 497 aaKnown RBP17.4■□□□□ 0.38
NUP54-205ENST00000507257 MAN2B2Q9Y2E5 1009 aa17.4■□□□□ 0.38
NUP54-205ENST00000507257 ASB1Q9Y576 335 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms