RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 KRT87PA6NCN2 255 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 RFPL3O75679 317 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 PNLIPP16233 465 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 BDKRB1P46663 353 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 SLCO1A2P46721 670 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 RGS4P49798 205 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 SERPINB9P50453 376 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 RAB10P61026 200 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 NR1D2Q14995 579 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 NKAIN2Q5VXU1 208 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 KIR3DX1Q9H7L2 352 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 POPDC3Q9HBV1 291 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 ANKRD12Q6UB98 2062 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 SMIM23A6NLE4 172 aa29.77■■■□□ 2.36
CSNK1E-206ENST00000413574 WISP3O95389 354 aaPredicted RBP29.77■■■□□ 2.36
CSNK1E-206ENST00000413574 GP1BAP07359 652 aa29.77■■■□□ 2.36
CSNK1E-206ENST00000413574 MPC1LP0DKB6 136 aa29.77■■■□□ 2.36
CSNK1E-206ENST00000413574 CCL7P80098 99 aa29.77■■■□□ 2.36
CSNK1E-206ENST00000413574 CCSMST1Q4G0I0 132 aa29.77■■■□□ 2.36
CSNK1E-206ENST00000413574 UNC5DQ6UXZ4 953 aa29.77■■■□□ 2.36
CSNK1E-206ENST00000413574 NEK10Q6ZWH5 1172 aa29.77■■■□□ 2.36
CSNK1E-206ENST00000413574 TBC1D21Q8IYX1 336 aa29.77■■■□□ 2.36
CSNK1E-206ENST00000413574 SPATA6LQ8N4H0 392 aa29.77■■■□□ 2.36
CSNK1E-206ENST00000413574 EPS8L3Q8TE67 593 aaKnown RBP29.77■■■□□ 2.36
CSNK1E-206ENST00000413574 UNKQ9C0B0 810 aaKnown RBP29.77■■■□□ 2.36
CSNK1E-206ENST00000413574 KCNK4Q9NYG8 393 aa29.77■■■□□ 2.36
CSNK1E-206ENST00000413574 FETUBQ9UGM5 382 aa29.77■■■□□ 2.36
CSNK1E-206ENST00000413574 TBK1Q9UHD2 729 aa29.77■■■□□ 2.36
CSNK1E-206ENST00000413574 PLAGL1Q9UM63 463 aa29.77■■■□□ 2.36
CSNK1E-206ENST00000413574 CCDC151A5D8V7 595 aa29.76■■■□□ 2.35
CSNK1E-206ENST00000413574 ALDOAP04075 364 aaKnown RBP29.76■■■□□ 2.35
CSNK1E-206ENST00000413574 TPBGLP0DKB5 382 aa29.76■■■□□ 2.35
CSNK1E-206ENST00000413574 NDUFS1P28331 727 aa29.76■■■□□ 2.35
CSNK1E-206ENST00000413574 MAPK9P45984 424 aa29.76■■■□□ 2.35
CSNK1E-206ENST00000413574 GPR3P46089 330 aa29.76■■■□□ 2.35
CSNK1E-206ENST00000413574 PLCL1Q15111 1095 aa29.76■■■□□ 2.35
CSNK1E-206ENST00000413574 AMZ1Q400G9 498 aa29.76■■■□□ 2.35
CSNK1E-206ENST00000413574 RAPH1Q70E73 1250 aa29.76■■■□□ 2.35
CSNK1E-206ENST00000413574 RBM12BQ8IXT5 1001 aaKnown RBP29.76■■■□□ 2.35
CSNK1E-206ENST00000413574 FOPNLQ96NB1 174 aa29.76■■■□□ 2.35
CSNK1E-206ENST00000413574 LDHAL6BQ9BYZ2 381 aaPredicted RBP29.76■■■□□ 2.35
CSNK1E-206ENST00000413574 SYNDIG1Q9H7V2 258 aa29.76■■■□□ 2.35
CSNK1E-206ENST00000413574 SNX15Q9NRS6 342 aa29.76■■■□□ 2.35
CSNK1E-206ENST00000413574 IKZF3Q9UKT9 509 aa29.76■■■□□ 2.35
CSNK1E-206ENST00000413574 TRIM49D1C9J1S8 452 aa29.75■■■□□ 2.35
CSNK1E-206ENST00000413574 EIF3FO00303 357 aaPredicted RBP29.75■■■□□ 2.35
CSNK1E-206ENST00000413574 KRT38O76015 456 aa29.75■■■□□ 2.35
CSNK1E-206ENST00000413574 C1orf105O95561 183 aa29.75■■■□□ 2.35
CSNK1E-206ENST00000413574 NUDT17P0C025 328 aa29.75■■■□□ 2.35
CSNK1E-206ENST00000413574 PUM1Q14671 1186 aaKnown RBP eCLIP29.75■■■□□ 2.35
CSNK1E-206ENST00000413574 MYO1HQ8N1T3 1032 aa29.75■■■□□ 2.35
CSNK1E-206ENST00000413574 OR52E1Q8NGJ3 308 aa29.75■■■□□ 2.35
CSNK1E-206ENST00000413574 ASB11Q8WXH4 323 aa29.75■■■□□ 2.35
CSNK1E-206ENST00000413574 UCK1Q9HA47 277 aa29.75■■■□□ 2.35
CSNK1E-206ENST00000413574 SYTL2Q9HCH5 934 aa29.75■■■□□ 2.35
CSNK1E-206ENST00000413574 ADAMTS6Q9UKP5 1117 aa29.75■■■□□ 2.35
CSNK1E-206ENST00000413574 IGHV1OR21-1A0A087WYE8 117 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 A0A1W2PQM1 296 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 PSIP1O75475 530 aaKnown RBP29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 ERLIN1O75477 346 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 RPLP0P05388 317 aaKnown RBP29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 SLC35E2BP0CK96 405 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 TYRP1P17643 537 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 CLDN6P56747 220 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 PPM1JQ5JR12 505 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 DHRS13Q6UX07 377 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 TAOK1Q7L7X3 1001 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 XKR8Q9H6D3 395 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 PSMC3IPQ9P2W1 217 aaPredicted RBP29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 PLAAQ9Y263 795 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 PCDHGA1Q9Y5H4 931 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 LILRA5A6NI73 299 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 ARHGEF33A8MVX0 844 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 CCDC166P0CW27 439 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 PPM1FP49593 454 aaPredicted RBP29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 ILKQ13418 452 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 GRB7Q14451 532 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 EEF1AKMT2Q5JPI9 291 aaKnown RBP29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 USP53Q70EK8 1073 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 NKAPQ8N5F7 415 aaKnown RBP29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 ZFPM2Q8WW38 1151 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 DLG3Q92796 817 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 ABCG4Q9H172 646 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 LRRN3Q9H3W5 708 aa29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 ATXN7L1Q9ULK2 861 aaPredicted RBP29.74■■■□□ 2.35
CSNK1E-206ENST00000413574 OPA1O60313 960 aa29.73■■■□□ 2.35
CSNK1E-206ENST00000413574 SNRPAP09012 282 aaKnown RBP29.73■■■□□ 2.35
CSNK1E-206ENST00000413574 CNTFP26441 200 aa29.73■■■□□ 2.35
CSNK1E-206ENST00000413574 CD1CP29017 333 aa29.73■■■□□ 2.35
CSNK1E-206ENST00000413574 SERPINB8P50452 374 aa29.73■■■□□ 2.35
CSNK1E-206ENST00000413574 CSRP3P50461 194 aa29.73■■■□□ 2.35
CSNK1E-206ENST00000413574 BEND6Q5SZJ8 279 aaPredicted RBP29.73■■■□□ 2.35
CSNK1E-206ENST00000413574 DCUN1D3Q8IWE4 304 aa29.73■■■□□ 2.35
CSNK1E-206ENST00000413574 LMNTD1Q8N9Z9 388 aa29.73■■■□□ 2.35
CSNK1E-206ENST00000413574 OR4E2Q8NGC2 313 aa29.73■■■□□ 2.35
CSNK1E-206ENST00000413574 RDH14Q9HBH5 336 aa29.73■■■□□ 2.35
CSNK1E-206ENST00000413574 OGFRQ9NZT2 677 aa29.73■■■□□ 2.35
CSNK1E-206ENST00000413574 APOBEC2Q9Y235 224 aaKnown RBP29.73■■■□□ 2.35
CSNK1E-206ENST00000413574 COL27A1Q8IZC6 1860 aaPredicted RBP29.73■■■□□ 2.35
CSNK1E-206ENST00000413574 GFYI3L273 518 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms