RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 RAE1P78406 368 aaKnown RBP4.85□□□□□ -1.63
GABPB1-204ENST00000396464 PPP1R8Q12972 351 aaKnown RBP4.85□□□□□ -1.63
GABPB1-204ENST00000396464 GRIK3Q13003 919 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 KRT33BQ14525 404 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 ELAVL1Q15717 326 aaKnown RBP4.85□□□□□ -1.63
GABPB1-204ENST00000396464 PDK4Q16654 411 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 CLPPQ16740 277 aaPredicted RBP4.85□□□□□ -1.63
GABPB1-204ENST00000396464 SMTNL2Q2TAL5 461 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 SPOUT1Q5T280 376 aaKnown RBP4.85□□□□□ -1.63
GABPB1-204ENST00000396464 HIST2H2BCQ6DN03 193 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 HIST2H2BDQ6DRA6 164 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 LRRC8EQ6NSJ5 796 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 LCTLQ6UWM7 567 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 DLEU7Q6UYE1 221 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 HTR3DQ70Z44 454 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 LINC00469Q8N7U9 141 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 FADS6Q8N9I5 356 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 ZFP28Q8NHY6 868 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 STARD8Q92502 1023 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 APBB2Q92870 758 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 CTHRC1Q96CG8 243 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 OTUB1Q96FW1 271 aaPredicted RBP4.85□□□□□ -1.63
GABPB1-204ENST00000396464 GPHA2Q96T91 129 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 PCDHB18PQ96TA0 734 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 OLFM1Q99784 485 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 RIOK1Q9BRS2 568 aaKnown RBP4.85□□□□□ -1.63
GABPB1-204ENST00000396464 MTG1Q9BT17 334 aaPredicted RBP4.85□□□□□ -1.63
GABPB1-204ENST00000396464 CADM1Q9BY67 442 aaKnown RBP4.85□□□□□ -1.63
GABPB1-204ENST00000396464 NAPBQ9H115 298 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 FN3KQ9H479 309 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 EXO5Q9H790 373 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 EQTNQ9NQ60 294 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 BARHL2Q9NY43 387 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 TAS2R14Q9NYV8 317 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 KIAA1257Q9ULG3 409 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 GPR132Q9UNW8 380 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 AP4B1Q9Y6B7 739 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 COMMD3-BMI1R4GMX3 469 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 UTYO14607 1347 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 BRD4O60885 1362 aaPredicted RBP4.85□□□□□ -1.63
GABPB1-204ENST00000396464 UNC13AQ9UPW8 1703 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 A0A075B6Q4 140 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 C17orf102A2RUQ5 167 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 KBTBD13C9JR72 458 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 H0YIG0 161 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 MAGEB2O15479 319 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 PPIP5K2O43314 1243 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 CIDEAO60543 219 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 ECI2O75521 394 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 MT-CYBP00156 380 aaPredicted RBP4.84□□□□□ -1.63
GABPB1-204ENST00000396464 HIST1H2ABP04908 130 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 ZNF37AP17032 561 aaPredicted RBP4.84□□□□□ -1.63
GABPB1-204ENST00000396464 HIST1H2ADP20671 130 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 MATN1P21941 496 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 BMP5P22003 454 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 SLC6A12P48065 614 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 OAZ1P54368 228 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 AIF1P55008 147 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 LIPEQ05469 1076 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 HSPA14Q0VDF9 509 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 HSPB3Q12988 150 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 SRSF5Q13243 272 aaKnown RBP4.84□□□□□ -1.63
GABPB1-204ENST00000396464 TNK1Q13470 666 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 SHBQ15464 509 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 ME3Q16798 604 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 FAM98BQ52LJ0 330 aaKnown RBP4.84□□□□□ -1.63
GABPB1-204ENST00000396464 TMEM41BQ5BJD5 291 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 XKR3Q5GH77 459 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 LRRC73Q5JTD7 316 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.84□□□□□ -1.63
GABPB1-204ENST00000396464 DCAF12L2Q5VW00 463 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 TAF3Q5VWG9 929 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 AADACL2Q6P093 401 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 ANKRD16Q6P6B7 361 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 ZNF813Q6ZN06 617 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 Q6ZRM9 215 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 MICALCLQ6ZW33 695 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 HIST3H2AQ7L7L0 130 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 NRROSQ86YC3 692 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 GRAMD2AQ8IUY3 354 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 FOXP4Q8IVH2 680 aaPredicted RBP4.84□□□□□ -1.63
GABPB1-204ENST00000396464 ZDHHC23Q8IYP9 409 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 FAM109AQ8N4B1 249 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 RNF148Q8N7C7 305 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 HUS1BQ8NHY5 278 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 TRPC4APQ8TEL6 797 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 HAS1Q92839 578 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 CAVIN3Q969G5 261 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 ESAMQ96AP7 390 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 TMIGD2Q96BF3 282 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 PGM2Q96G03 612 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 RPGRIP1Q96KN7 1286 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 NUDCD1Q96RS6 583 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 DCLRE1CQ96SD1 692 aaKnown RBP4.84□□□□□ -1.63
GABPB1-204ENST00000396464 PCYT2Q99447 389 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 ADAM2Q99965 735 aa4.84□□□□□ -1.63
GABPB1-204ENST00000396464 GTPBP2Q9BX10 602 aaKnown RBP4.84□□□□□ -1.63
GABPB1-204ENST00000396464 PNNQ9H307 717 aaKnown RBP4.84□□□□□ -1.63
GABPB1-204ENST00000396464 IL23AQ9NPF7 189 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms