RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 MAIP1Q8WWC4 291 aa17.21■□□□□ 0.35
HDDC3-201ENST00000330334 ELMO1Q92556 727 aa17.21■□□□□ 0.35
HDDC3-201ENST00000330334 ABHD17AQ96GS6 310 aa17.21■□□□□ 0.35
HDDC3-201ENST00000330334 PPM1MQ96MI6 270 aa17.21■□□□□ 0.35
HDDC3-201ENST00000330334 CHRNA10Q9GZZ6 450 aa17.21■□□□□ 0.35
HDDC3-201ENST00000330334 AKIRIN1Q9H9L7 192 aaPredicted RBP17.21■□□□□ 0.35
HDDC3-201ENST00000330334 EIF2B3Q9NR50 452 aaKnown RBP17.21■□□□□ 0.35
HDDC3-201ENST00000330334 OR6C2Q9NZP2 312 aa17.21■□□□□ 0.35
HDDC3-201ENST00000330334 TCAF1Q9Y4C2 921 aa17.21■□□□□ 0.35
HDDC3-201ENST00000330334 UBR5O95071 2799 aaPredicted RBP17.2■□□□□ 0.34
HDDC3-201ENST00000330334 GSAPA4D1B5 854 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 BHMG1C9JSJ3 638 aaPredicted RBP17.2■□□□□ 0.34
HDDC3-201ENST00000330334 GOT2P00505 430 aaKnown RBP17.2■□□□□ 0.34
HDDC3-201ENST00000330334 KLK3P07288 261 aaPredicted RBP17.2■□□□□ 0.34
HDDC3-201ENST00000330334 FURINP09958 794 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 CCDC175P0C221 793 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 ETS1P14921 441 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 SHMT2P34897 504 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 RPS15P62841 145 aaKnown RBP17.2■□□□□ 0.34
HDDC3-201ENST00000330334 NFKB2Q00653 900 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 PRKG2Q13237 762 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 SNX1Q13596 522 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 FBXO38Q6PIJ6 1188 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 SYVN1Q86TM6 617 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 APLFQ8IW19 511 aaPredicted RBP17.2■□□□□ 0.34
HDDC3-201ENST00000330334 SLC38A9Q8NBW4 561 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 OR5K2Q8NHB8 316 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 THAP4Q8WY91 577 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 CPT1BQ92523 772 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 ZNF778Q96MU6 729 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 TRAPPC9Q96Q05 1148 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 ACTL8Q9H568 366 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 CLMPQ9H6B4 373 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 SLC2A6Q9UGQ3 507 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 SERTAD3Q9UJW9 196 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 ANAPC2Q9UJX6 822 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 ASF1AQ9Y294 204 aa17.2■□□□□ 0.34
HDDC3-201ENST00000330334 PIKFYVEQ9Y2I7 2098 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 CCDC78A2IDD5 438 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 KDM1AO60341 852 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 OR1I1O60431 355 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 RAB40ALP0C0E4 278 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 ST6GAL1P15907 406 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 RPL22P35268 128 aaKnown RBP17.19■□□□□ 0.34
HDDC3-201ENST00000330334 GPS2Q13227 327 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 UGT8Q16880 541 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 FASTKD1Q53R41 847 aaKnown RBP17.19■□□□□ 0.34
HDDC3-201ENST00000330334 ZNF789Q5FWF6 425 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 AARS2Q5JTZ9 985 aaKnown RBP17.19■□□□□ 0.34
HDDC3-201ENST00000330334 PCID2Q5JVF3 399 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 PLEKHS1Q5SXH7 462 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 ZNF534Q76KX8 674 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 GLIS1Q8NBF1 620 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 TRIM58Q8NG06 486 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 OR5AR1Q8NGP9 310 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 OR6P1Q8NGX9 317 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 RNF31Q96EP0 1072 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 HGH1Q9BTY7 390 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 CARD6Q9BX69 1037 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 TLR10Q9BXR5 811 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 HOMER3Q9NSC5 361 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 ACTR10Q9NZ32 417 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 ICKQ9UPZ9 632 aa17.19■□□□□ 0.34
HDDC3-201ENST00000330334 FARSAQ9Y285 508 aaKnown RBP17.19■□□□□ 0.34
HDDC3-201ENST00000330334 MEN1O00255 615 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 ZIC2O95409 532 aaPredicted RBP17.18■□□□□ 0.34
HDDC3-201ENST00000330334 RORAP35398 523 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 PMS2P54278 862 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 PRAMEP78395 509 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 CDK16Q00536 496 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 DNAJC21Q5F1R6 531 aaKnown RBP17.18■□□□□ 0.34
HDDC3-201ENST00000330334 TCTN3Q6NUS6 607 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 FAM199XQ6PEV8 388 aaPredicted RBP17.18■□□□□ 0.34
HDDC3-201ENST00000330334 SPESP1Q6UW49 350 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 UNC5AQ6ZN44 842 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 PRUNE1Q86TP1 453 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 LRRC8AQ8IWT6 810 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 DSELQ8IZU8 1212 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 PPHLN1Q8NEY8 458 aaKnown RBP17.18■□□□□ 0.34
HDDC3-201ENST00000330334 ASZ1Q8WWH4 475 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 MR1Q95460 341 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 TCTN2Q96GX1 697 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 DPH2Q9BQC3 489 aaPredicted RBP17.18■□□□□ 0.34
HDDC3-201ENST00000330334 TSSK1BQ9BXA7 367 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 IL22Q9GZX6 179 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 XKR8Q9H6D3 395 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 LZTFL1Q9NQ48 299 aa17.18■□□□□ 0.34
HDDC3-201ENST00000330334 CDC14CA4D256 554 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 TMEM150CB9EJG8 249 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 MKRN2OSH3BPM6 223 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 GPC4O75487 556 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 HBQ1P09105 142 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 ZSCAN5DPP0CG00 497 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 TPBGLP0DKB5 382 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 CASRP41180 1078 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 NPY2RP49146 381 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 TTPAP49638 278 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 ABRQ12979 859 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 SYTL3Q4VX76 610 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 LACTB2Q53H82 288 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms