RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 TUBG1P23258 451 aa16.55■□□□□ 0.24
TSPAN3-201ENST00000267970 FOXN2P32314 431 aa16.55■□□□□ 0.24
TSPAN3-201ENST00000267970 ADAM8P78325 824 aa16.55■□□□□ 0.24
TSPAN3-201ENST00000267970 ZNF782Q6ZMW2 699 aaPredicted RBP16.55■□□□□ 0.24
TSPAN3-201ENST00000267970 OR4C6Q8NH72 309 aa16.55■□□□□ 0.24
TSPAN3-201ENST00000267970 PSMG2Q969U7 264 aa16.55■□□□□ 0.24
TSPAN3-201ENST00000267970 POLR2J2Q9GZM3 115 aaKnown RBP16.55■□□□□ 0.24
TSPAN3-201ENST00000267970 AGPSO00116 658 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 PLK4O00444 970 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 SLC3A1Q07837 685 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 RASGEF1CQ8N431 466 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 BRSK1Q8TDC3 778 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 HERC2P3Q9BVR0 1158 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 KCNN2Q9H2S1 579 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 GPR89AB7ZAQ6 455 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 TFPTP0C1Z6 253 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 GPR89BP0CG08 455 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 CBLP22681 906 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 CCDC54Q8NEL0 328 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 MGME1Q9BQP7 344 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 KIAA1522Q9P206 1035 aaPredicted RBP16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 UBIAD1Q9Y5Z9 338 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 APOL3O95236 402 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 PAPSS2O95340 614 aaPredicted RBP16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 TSHRP16473 764 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 ACSL1P33121 698 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 MTA1Q13330 715 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 WSCD2Q2TBF2 565 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 MED27Q6P2C8 311 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 MON1BQ7L1V2 547 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 SLC22A16Q86VW1 577 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 GALNT11Q8NCW6 608 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 GATA5Q9BWX5 397 aaPredicted RBP16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 TNS2Q63HR2 1409 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 KMOO15229 486 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 GLUD1P00367 558 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 ADRA1BP35368 520 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 RFT1Q96AA3 541 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 TRIM2Q9C040 744 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 ZNF639Q9UID6 485 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 MTX2O75431 263 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 LMO2P25791 158 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 RPS3AP61247 264 aaKnown RBP16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 PRKCDQ05655 676 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 PTGES3Q15185 160 aaKnown RBP16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 PRR23BQ6ZRT6 265 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 FARSAQ9Y285 508 aaKnown RBP16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 CAMSAP1Q5T5Y3 1602 aa16.54■□□□□ 0.24
TSPAN3-201ENST00000267970 DAPL1A0PJW8 107 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 HMGCS1Q01581 520 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 SLC13A2Q13183 592 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 PIK3R3Q92569 461 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 UNC93B1Q9H1C4 597 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 TEX46H3BTG2 121 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 SPAM1P38567 509 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 CTSOP43234 321 aaPredicted RBP16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 NADK2Q4G0N4 442 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 HGSNATQ68CP4 663 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 SMYD5Q6GMV2 418 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 ZNF598Q86UK7 904 aaKnown RBP16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 DPEP2Q9H4A9 486 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 METTL8Q9H825 291 aaKnown RBP16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 KCND1Q9NSA2 647 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 IFT80Q9P2H3 777 aaPredicted RBP16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 TCAF1Q9Y4C2 921 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 C13orf42A0A1B0GVH6 325 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 GPR142Q7Z601 462 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 GATAD2BQ8WXI9 593 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 SLC38A4Q969I6 547 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 PCDH10Q9P2E7 1040 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 FAM237AA0A1B0GTK4 181 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 SAGE2PA6NJ88 616 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 KHNYNO15037 678 aaKnown RBP16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 PER2O15055 1255 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 SLC31A1O15431 190 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 SSX5O60225 188 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 TULP3O75386 442 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 SIX3O95343 332 aaPredicted RBP16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 VIPP01282 170 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 IL7RP16871 459 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 GRIA1P42261 906 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 SLC1A2P43004 574 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 RORCP51449 518 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 LACTB2Q53H82 288 aaPredicted RBP16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 RAB12Q6IQ22 244 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 TMEM220Q6QAJ8 160 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 OR5M3Q8NGP4 307 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 POLR3BQ9NW08 1133 aaPredicted RBP16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 LDB2O43679 373 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 GABBR2O75899 941 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 GBAP04062 536 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 PRKACGP22612 351 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 IRF2BP1Q8IU81 584 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 MCEMP1Q8IX19 187 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 CRELD1Q96HD1 420 aa16.53■□□□□ 0.24
TSPAN3-201ENST00000267970 GCATO75600 419 aa16.52■□□□□ 0.24
TSPAN3-201ENST00000267970 TGFB1P01137 390 aa16.52■□□□□ 0.24
TSPAN3-201ENST00000267970 PPIBP23284 216 aaKnown RBP16.52■□□□□ 0.24
TSPAN3-201ENST00000267970 ZNF267Q14586 743 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms