RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 CA9Q16790 459 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 LRRC20Q8TCA0 184 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 EZH1Q92800 747 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 GIN1Q9NXP7 522 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 CLCA3PQ9Y6N3 262 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 PLD2O14939 933 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 PSMD10O75832 226 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 HSPA7P48741 367 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 HNRNPKP61978 463 aaKnown RBP eCLIP16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 PTF1AQ7RTS3 328 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 SYVN1Q86TM6 617 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 POGLUT1Q8NBL1 392 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 TMEM203Q969S6 136 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 TLR10Q9BXR5 811 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 MSR1P21757 451 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 MAPK12P53778 367 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 CREMQ03060 361 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 LYPLAL1Q5VWZ2 237 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 PRSS55Q6UWB4 352 aaPredicted RBP16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 TBC1D21Q8IYX1 336 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 CNTD1Q8N815 330 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 CD300LFQ8TDQ1 290 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 TMED9Q9BVK6 235 aa16.76■□□□□ 0.27
CACNA1A-253ENST00000637927 PSKH1P11801 424 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 LRRC37A5PQ49AS3 106 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 INTS6LQ5JSJ4 861 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 ATAT1Q5SQI0 421 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 PIWIL1Q96J94 861 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 PSMG1O95456 288 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 GRK6P43250 576 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 TNK2Q07912 1038 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 BROXQ5VW32 411 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 LPCAT4Q643R3 524 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 TNFAIP8L2Q6P589 184 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 DLK2Q6UY11 383 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 TMED4Q7Z7H5 227 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 KIF18BQ86Y91 864 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 SIDT2Q8NBJ9 832 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 SH3YL1Q96HL8 342 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 CHCHD6Q9BRQ6 235 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 C12orf65Q9H3J6 166 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 MAU2Q9Y6X3 613 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 FAM149AA5PLN7 773 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 MEIS2O14770 477 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 PRKAA2P54646 552 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 ACTR3P61158 418 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 AHSA2Q719I0 299 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 UNC5BQ8IZJ1 945 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 OR4K2Q8NGD2 314 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 SLC7A6OSQ96CW6 309 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 BARD1Q99728 777 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 FTHL17Q9BXU8 183 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 GRHL1Q9NZI5 618 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 CABYRO75952 493 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 CDK14O94921 469 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 MAP3K8P41279 467 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 SMYD5Q6GMV2 418 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 NIPA1Q7RTP0 329 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 ARL14EPQ8N8R7 260 aaPredicted RBP16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 TMEM161BQ8NDZ6 487 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 OR4C6Q8NH72 309 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 DEC1Q9P2X7 70 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 JMJD7P0C870 316 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 ITGA2P17301 1181 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 CXCR1P25024 350 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 LIPEQ05469 1076 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 TMEM220Q6QAJ8 160 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 OR7D4Q8NG98 312 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 RASSF5Q8WWW0 418 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 BAP1Q92560 729 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 VCPIP1Q96JH7 1222 aa16.75■□□□□ 0.27
CACNA1A-253ENST00000637927 PDE2AO00408 941 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 TLX3O43711 291 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 ITGA2BP08514 1039 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 IL7RP16871 459 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 RAB4AP20338 218 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 CD247P20963 164 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 CLCN5P51795 746 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 CYP2U1Q7Z449 544 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 CERS5Q8N5B7 392 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 SPPL2BQ8TCT7 592 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 KCTD15Q96SI1 283 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 TCF7L1Q9HCS4 588 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 COMMD3Q9UBI1 195 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 COMMD3-BMI1R4GMX3 469 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 SETBP1Q9Y6X0 1596 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 BRINP1O60477 761 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 ALADP13716 330 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 HNF1BP35680 557 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 ARPC4P59998 168 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 DCDC5Q6ZRR9 648 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 PHTF2Q8N3S3 785 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 FAM46DQ8NEK8 389 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 MLXQ9UH92 298 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 FAM240BA0A1B0GVZ2 78 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 MPSTP25325 297 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 PSME3P61289 254 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 SLC3A1Q07837 685 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 HYAL4Q2M3T9 481 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms