RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ATP1B2P14415 290 aaPredicted RBP15.33■□□□□ 0.04
USB1-208ENST00000563207 LIFP15018 202 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 CSTF2P33240 577 aaKnown RBP eCLIP15.33■□□□□ 0.04
USB1-208ENST00000563207 ELK3P41970 407 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 CLCNKAP51800 687 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 GFERP55789 205 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 GSTM4Q03013 218 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 CRYMQ14894 314 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 CLCA4Q14CN2 919 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 SEPT7Q16181 437 aaKnown RBP15.33■□□□□ 0.04
USB1-208ENST00000563207 RNF187Q5TA31 235 aaPredicted RBP15.33■□□□□ 0.04
USB1-208ENST00000563207 CES3Q6UWW8 571 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 ZDHHC24Q6UX98 284 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 MICALCLQ6ZW33 695 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 ARHGAP22Q7Z5H3 698 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 IFT20Q8IY31 132 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 PIANPQ8IYJ0 282 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 OR10G6Q8NH81 332 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 NAT14Q8WUY8 206 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 TIMM29Q9BSF4 260 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 OSGEPL1Q9H4B0 414 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 FAM96AQ9H5X1 160 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 AKAP7Q9P0M2 348 aaPredicted RBP15.33■□□□□ 0.04
USB1-208ENST00000563207 ZNF624Q9P2J8 865 aaPredicted RBP15.33■□□□□ 0.04
USB1-208ENST00000563207 CPNE7Q9UBL6 633 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 PCDHGA3Q9Y5H0 932 aa15.33■□□□□ 0.04
USB1-208ENST00000563207 SETXQ7Z333 2677 aaKnown RBP15.32■□□□□ 0.04
USB1-208ENST00000563207 BSNQ9UPA5 3926 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 COL6A6A6NMZ7 2263 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 OR51F1A6NGY5 319 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 BRAFP15056 766 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 ZNF7P17097 686 aaPredicted RBP15.32■□□□□ 0.04
USB1-208ENST00000563207 TYRP1P17643 537 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 VCLP18206 1134 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 ITGB6P18564 788 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 OGNP20774 298 aaKnown RBP15.32■□□□□ 0.04
USB1-208ENST00000563207 ARNTP27540 789 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 CDKN1CP49918 316 aaPredicted RBP15.32■□□□□ 0.04
USB1-208ENST00000563207 UBE2IP63279 158 aaKnown RBP15.32■□□□□ 0.04
USB1-208ENST00000563207 GPLD1P80108 840 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 NFATC3Q12968 1075 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 TRA2AQ13595 282 aaKnown RBP eCLIP15.32■□□□□ 0.04
USB1-208ENST00000563207 THOC5Q13769 683 aaKnown RBP15.32■□□□□ 0.04
USB1-208ENST00000563207 TRADDQ15628 312 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 DBN1Q16643 649 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 CLPPQ16740 277 aaPredicted RBP15.32■□□□□ 0.04
USB1-208ENST00000563207 BCL7AQ4VC05 210 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 TMEM164Q5U3C3 297 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 STEAP4Q687X5 459 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 NEPROQ6NW34 567 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 TIPARPQ7Z3E1 657 aaKnown RBP15.32■□□□□ 0.04
USB1-208ENST00000563207 TRAPPC5Q8IUR0 188 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 ZBED8Q8IZ13 594 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 UNC5BQ8IZJ1 945 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 RASGEF1AQ8N9B8 481 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 PYROXD1Q8WU10 500 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 LINC00615Q96LM1 132 aaPredicted RBP15.32■□□□□ 0.04
USB1-208ENST00000563207 PWWP2AQ96N64 755 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 SLC12A9Q9BXP2 914 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 SPRY4Q9C004 299 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 VPS37BQ9H9H4 285 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 ZDHHC18Q9NUE0 388 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 CHMP2BQ9UQN3 213 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 PCDHB11Q9Y5F2 797 aa15.32■□□□□ 0.04
USB1-208ENST00000563207 ESYT3A0FGR9 886 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 PRR19A6NJB7 356 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 STMND1H3BQB6 276 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 J3QKU1 62 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 ZW10O43264 779 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 DUX1O43812 170 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 SLU7O95391 586 aaKnown RBP15.31■□□□□ 0.04
USB1-208ENST00000563207 GSTA2P09210 222 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 RPL10P27635 214 aaKnown RBP15.31■□□□□ 0.04
USB1-208ENST00000563207 SLC19A1P41440 591 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 TYSND1Q2T9J0 566 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 TMEM220Q6QAJ8 160 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 WDR74Q6RFH5 385 aaPredicted RBP15.31■□□□□ 0.04
USB1-208ENST00000563207 CYS1Q717R9 158 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 LRRC6Q86X45 466 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 PALM2Q8IXS6 379 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 EIF1ADQ8N9N8 165 aaKnown RBP15.31■□□□□ 0.04
USB1-208ENST00000563207 FBXO36Q8NEA4 188 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 FAM167BQ9BTA0 163 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 SAYSD1Q9NPB0 183 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 C20orf96Q9NUD7 363 aaPredicted RBP15.31■□□□□ 0.04
USB1-208ENST00000563207 INTS10Q9NVR2 710 aaKnown RBP15.31■□□□□ 0.04
USB1-208ENST00000563207 PILRAQ9UKJ1 303 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 WDR37Q9Y2I8 494 aa15.31■□□□□ 0.04
USB1-208ENST00000563207 C17orf113A0A1B0GUU1 675 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 OR52A4PA6NMU1 304 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 B4E171 279 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 RAD1O60671 282 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 NDUFS3O75489 264 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 BANF1O75531 89 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 OR56A5P0C7T3 313 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 PRSS56P0CW18 603 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 TSPAN7P41732 249 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 LEPRP48357 1165 aaKnown RBP15.3■□□□□ 0.04
USB1-208ENST00000563207 PRLHRP49683 370 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 ADARP55265 1226 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms