RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 MAGEA13PA6NCF6 341 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 HAS3O00219 553 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 TGFB1P01137 390 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 UGT2B15P54855 530 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 ZIK1Q3SY52 487 aaPredicted RBP17.04■□□□□ 0.32
PTPN21-208ENST00000556564 ISLR2Q6UXK2 745 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 PRR5-ARHGAP8B1AHC4 643 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 PLK4O00444 970 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 OR6B1O95007 311 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 ARHGAP8P85298 464 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 SLC34A1Q06495 639 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 KCNJ11Q14654 390 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 DGKKQ5KSL6 1271 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 CPSF7Q8N684 471 aaKnown RBP17.04■□□□□ 0.32
PTPN21-208ENST00000556564 MAPK15Q8TD08 544 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 DEPDC7Q96QD5 511 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 K7EPI3 171 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 GRID2O43424 1007 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 INO80DQ53TQ3 878 aaPredicted RBP17.04■□□□□ 0.32
PTPN21-208ENST00000556564 TOP1MTQ969P6 601 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 MAST2Q6P0Q8 1798 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 TIAM2Q8IVF5 1701 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 EDF1O60869 148 aaKnown RBP17.04■□□□□ 0.32
PTPN21-208ENST00000556564 TOP3BO95985 862 aaKnown RBP17.04■□□□□ 0.32
PTPN21-208ENST00000556564 DRD4P21917 467 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 CSTF2P33240 577 aaKnown RBP eCLIP17.04■□□□□ 0.32
PTPN21-208ENST00000556564 SLC7A2P52569 658 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 PNLIPRP1P54315 467 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 RING1Q06587 406 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 NR1D2Q14995 579 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 PGAP2Q9UHJ9 254 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 PTSQ03393 145 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 GCNT6Q5T4J0 391 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 GPRC6AQ5T6X5 926 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 SPESP1Q6UW49 350 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 SETD9Q8NE22 299 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 EEF1AKMT1Q8WVE0 214 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 TFB2MQ9H5Q4 396 aaKnown RBP17.04■□□□□ 0.32
PTPN21-208ENST00000556564 SEC14L3Q9UDX4 400 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 PCDHGA11Q9Y5H2 935 aa17.04■□□□□ 0.32
PTPN21-208ENST00000556564 ECI2O75521 394 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 PREPP48147 710 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 TNK2Q07912 1038 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 Q6ZVL8 140 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 MCEMP1Q8IX19 187 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 NAT14Q8WUY8 206 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 ADGRE2Q9UHX3 823 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 TMEM59LQ9UK28 342 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 TGDSO95455 350 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 MSX2P35548 267 aaPredicted RBP17.03■□□□□ 0.32
PTPN21-208ENST00000556564 ZNF783Q6ZMS7 281 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 WDR36Q8NI36 951 aaKnown RBP17.03■□□□□ 0.32
PTPN21-208ENST00000556564 MIPEPQ99797 713 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 CXorf49A8MYA2 514 aaPredicted RBP17.03■□□□□ 0.32
PTPN21-208ENST00000556564 K7ERQ8 282 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 EDN1P05305 212 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 ARSAP15289 507 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 JPH3Q8WXH2 748 aaPredicted RBP17.03■□□□□ 0.32
PTPN21-208ENST00000556564 TFGQ92734 400 aaPredicted RBP17.03■□□□□ 0.32
PTPN21-208ENST00000556564 TOX2Q96NM4 488 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 NRP2O60462 931 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 BTN3A2P78410 334 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 PRKD1Q15139 912 aaPredicted RBP17.03■□□□□ 0.32
PTPN21-208ENST00000556564 FAM98AQ8NCA5 519 aaKnown RBP17.03■□□□□ 0.32
PTPN21-208ENST00000556564 WDR6Q9NNW5 1121 aaKnown RBP17.03■□□□□ 0.32
PTPN21-208ENST00000556564 CNTN6Q9UQ52 1028 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 C9J4A7 227 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 PRR23D1E9PI22 279 aaPredicted RBP17.03■□□□□ 0.32
PTPN21-208ENST00000556564 PRR23D2P0DMB1 279 aaPredicted RBP17.03■□□□□ 0.32
PTPN21-208ENST00000556564 ZNF24P17028 368 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 BMP7P18075 431 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 CD70P32970 193 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 SMIM11AP58511 58 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 RAPSNQ13702 412 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 LPAL2Q16609 132 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 DHRSXQ8N5I4 330 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 ZNF641Q96N77 438 aaPredicted RBP17.03■□□□□ 0.32
PTPN21-208ENST00000556564 NDC1Q9BTX1 674 aa17.03■□□□□ 0.32
PTPN21-208ENST00000556564 SAMHD1Q9Y3Z3 626 aaKnown RBP17.03■□□□□ 0.32
PTPN21-208ENST00000556564 MLIPQ5VWP3 458 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 C5orf34Q96MH7 638 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 CEP44Q9C0F1 390 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 LINC00597Q9H2U6 94 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 ZC4H2Q9NQZ6 224 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 TMEM150CB9EJG8 249 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 PLIN3O60664 434 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 GSRP00390 522 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 HKDC1Q2TB90 917 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 ZNF542PQ5EBM4 170 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 PTCD3Q96EY7 689 aaKnown RBP17.02■□□□□ 0.32
PTPN21-208ENST00000556564 ZNF358Q9NW07 568 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 CDH7Q9ULB5 785 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 SLC22A14Q9Y267 594 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 LINC00854A0A1B0GVQ3 168 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 TP73O15350 636 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 MAN1A2O60476 641 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 TSPAN19P0C672 248 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 CDC42P60953 191 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 BNIP2Q12982 314 aa17.02■□□□□ 0.32
PTPN21-208ENST00000556564 FAM171BQ6P995 826 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms