RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 MYL1P05976 194 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 ZNF853P0CG23 659 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 ACP2P11117 423 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 SELLP14151 372 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 VEGFAP15692 232 aaPredicted RBP0.58□□□□□ -2.32
COPB1-212ENST00000534771 IL7RP16871 459 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 HLA-FP30511 346 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 PSMC2P35998 433 aaKnown RBP0.58□□□□□ -2.32
COPB1-212ENST00000534771 CPOXP36551 454 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 PIP4K2AP48426 406 aaPredicted RBP0.58□□□□□ -2.32
COPB1-212ENST00000534771 UCNP55089 124 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 KHDRBS1Q07666 443 aaKnown RBP eCLIP0.58□□□□□ -2.32
COPB1-212ENST00000534771 GAGE2BQ13066 116 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 UBE2V1Q13404 147 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 SLC12A1Q13621 1099 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 CAMK1Q14012 370 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 EFR3AQ14156 821 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 ALG11Q2TAA5 492 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 GAGE2EQ4V326 116 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 KLHL26Q53HC5 615 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 XKR4Q5GH76 650 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 FAM109BQ6ICB4 259 aaPredicted RBP0.58□□□□□ -2.32
COPB1-212ENST00000534771 GAGE2AQ6NT46 116 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 ZCCHC12Q6PEW1 402 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 SLC25A47Q6Q0C1 308 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 KIF6Q6ZMV9 814 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 GDPGP1Q6ZNW5 385 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 ZNF534Q76KX8 674 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 CHMP1BQ7LBR1 199 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 TIPARPQ7Z3E1 657 aaKnown RBP0.58□□□□□ -2.32
COPB1-212ENST00000534771 SDCCAG8Q86SQ7 713 aaPredicted RBP0.58□□□□□ -2.32
COPB1-212ENST00000534771 FAM131BQ86XD5 332 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 ZFAND4Q86XD8 727 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 PHC2Q8IXK0 858 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 FAM177A1Q8N128 213 aaPredicted RBP0.58□□□□□ -2.32
COPB1-212ENST00000534771 KLHDC1Q8N7A1 406 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 MYRIPQ8NFW9 859 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 VANGL1Q8TAA9 524 aaPredicted RBP0.58□□□□□ -2.32
COPB1-212ENST00000534771 TRAPPC12Q8WVT3 735 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 DAZLQ92904 295 aaKnown RBP0.58□□□□□ -2.32
COPB1-212ENST00000534771 BADQ92934 168 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 GTF3C6Q969F1 213 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 ZNF486Q96H40 463 aaPredicted RBP0.58□□□□□ -2.32
COPB1-212ENST00000534771 CEP295NLQ96MC4 621 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 GFI1Q99684 422 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 LBHD1Q9BQE6 289 aaPredicted RBP0.58□□□□□ -2.32
COPB1-212ENST00000534771 CHCHD5Q9BSY4 110 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 TDRD1Q9BXT4 1180 aaKnown RBP0.58□□□□□ -2.32
COPB1-212ENST00000534771 SLC39A8Q9C0K1 460 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 PARLQ9H300 379 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 PIGMQ9H3S5 423 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 PPANQ9NQ55 473 aaKnown RBP0.58□□□□□ -2.32
COPB1-212ENST00000534771 SDR39U1Q9NRG7 319 aaPredicted RBP0.58□□□□□ -2.32
COPB1-212ENST00000534771 MAN2C1Q9NTJ4 1040 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 GEMIN8Q9NWZ8 242 aaKnown RBP0.58□□□□□ -2.32
COPB1-212ENST00000534771 OR6C2Q9NZP2 312 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 GAGE2DQ9UEU5 116 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 GJD2Q9UKL4 321 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 B3GALT5Q9Y2C3 310 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 CLIC4Q9Y696 253 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 CSNK1G3Q9Y6M4 447 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 AHNAKQ09666 5890 aaKnown RBP0.58□□□□□ -2.32
COPB1-212ENST00000534771 ARHGEF40Q8TER5 1519 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 SHISA7A6NL88 538 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 EIF3CLB5ME19 914 aaKnown RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 F5H423 210 aaPredicted RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 TSPAN4O14817 238 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 ATP2A1O14983 1001 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 EPHB6O15197 1021 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 TMCC2O75069 709 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 FOXH1O75593 365 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 NKX2-2O95096 273 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 VTNP04004 478 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 PROS1P07225 676 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 IFIT2P09913 472 aaKnown RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 CA4P22748 312 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 LHCGRP22888 699 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 SERPINB3P29508 390 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 GNALP38405 381 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 ETV5P41161 510 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 SOX3P41225 446 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 CLCN4P51793 760 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 PPIAP62937 165 aaKnown RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 MRPS34P82930 218 aaKnown RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 ZBED6P86452 979 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 UBE4AQ14139 1066 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 MVPQ14764 893 aaKnown RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 MTF1Q14872 753 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 TAF5Q15542 800 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 MEP1AQ16819 746 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 CXorf66Q5JRM2 361 aaPredicted RBP0.57□□□□□ -2.32
COPB1-212ENST00000534771 FAM182AQ5T1J6 154 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 ATAD3CQ5T2N8 411 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 GCNT6Q5T4J0 391 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 MAP3K21Q5TCX8 1036 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 RNLSQ5VYX0 342 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 NAA35Q5VZE5 725 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 CES4AQ5XG92 561 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 ATG16L1Q676U5 607 aa0.57□□□□□ -2.32
COPB1-212ENST00000534771 NOTUMQ6P988 496 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms