RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 GFERP55789 205 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 PPP1CAP62136 330 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 TIAL1Q01085 375 aaKnown RBP eCLIP12.5□□□□□ -0.41
VEGFA-224ENST00000523873 PRKG2Q13237 762 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 FRG1Q14331 258 aaKnown RBP12.5□□□□□ -0.41
VEGFA-224ENST00000523873 PLCL1Q15111 1095 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 TMED2Q15363 201 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 ACSBG2Q5FVE4 666 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 SNAP47Q5SQN1 464 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 CCNI2Q6ZMN8 369 aaPredicted RBP12.5□□□□□ -0.41
VEGFA-224ENST00000523873 C3orf62Q6ZUJ4 267 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 OTOAQ7RTW8 1153 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 STRA8Q7Z7C7 330 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 PIM3Q86V86 326 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 ZBTB2Q8N680 514 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 GPATCH11Q8N954 259 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 AVL9Q8NBF6 648 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 ACVR1CQ8NER5 493 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 OR10G6Q8NH81 332 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 ASZ1Q8WWH4 475 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 NCSTNQ92542 709 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 TFGQ92734 400 aaPredicted RBP12.5□□□□□ -0.41
VEGFA-224ENST00000523873 FMO2Q99518 471 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 GPR21Q99679 349 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.5□□□□□ -0.41
VEGFA-224ENST00000523873 PHACTR1Q9C0D0 580 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 UCK1Q9HA47 277 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 NINJ2Q9NZG7 142 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 MTRF1LQ9UGC7 380 aaKnown RBP12.5□□□□□ -0.41
VEGFA-224ENST00000523873 KLHL3Q9UH77 587 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 SLC24A2Q9UI40 661 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 ANGPTL2Q9UKU9 493 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 PLAGL1Q9UM63 463 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 ASF1AQ9Y294 204 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 TDRKHQ9Y2W6 561 aaKnown RBP12.5□□□□□ -0.41
VEGFA-224ENST00000523873 NEUROG3Q9Y4Z2 214 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 NFS1Q9Y697 457 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 A0A1W2PNU3 283 aaPredicted RBP12.49□□□□□ -0.41
VEGFA-224ENST00000523873 KRT87PA6NCN2 255 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 A8MU76 341 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 DUX1O43812 170 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 TCEA3O75764 348 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 UBXN7O94888 489 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 SLCO2B1O94956 709 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 C1QAP02745 245 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 PROS1P07225 676 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 AMD1P17707 334 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 BDKRB1P46663 353 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 EPHA4P54764 986 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 INHBCP55103 352 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 CDKN2DP55273 166 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 GPLD1P80108 840 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 SHC2P98077 582 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 KYNUQ16719 465 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 PLEKHS1Q5SXH7 462 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 PHF19Q5T6S3 580 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 KIAA0408Q6ZU52 694 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 IFT20Q8IY31 132 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 CPNE9Q8IYJ1 553 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 LMNTD1Q8N9Z9 388 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 RCBTB1Q8NDN9 531 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 OR52E1Q8NGJ3 308 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 WDR48Q8TAF3 677 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 GABPB2Q8TAK5 448 aaPredicted RBP12.49□□□□□ -0.41
VEGFA-224ENST00000523873 CD200R1Q8TD46 325 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 FBF1Q8TES7 1133 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 SKA2Q8WVK7 121 aaPredicted RBP12.49□□□□□ -0.41
VEGFA-224ENST00000523873 CCDC74BQ96LY2 380 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 CDC42EP4Q9H3Q1 356 aaKnown RBP12.49□□□□□ -0.41
VEGFA-224ENST00000523873 XKR8Q9H6D3 395 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 KIR3DX1Q9H7L2 352 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 MSRB2Q9Y3D2 182 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 HEBP2Q9Y5Z4 205 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 CACNA1AO00555 2505 aa12.49□□□□□ -0.41
VEGFA-224ENST00000523873 IGHV5-10-1A0A0J9YXX1 117 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 FAM221BA6H8Z2 402 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 FAM159BA6NKW6 160 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 KPNA5O15131 536 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 ZW10O43264 779 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 FAM155BO75949 473 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 FAM153BP0C7A2 387 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 TPBGLP0DKB5 382 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 HGFP14210 728 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 SAT1P21673 171 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 MCM3P25205 808 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 ZFP36L1Q07352 338 aaKnown RBP12.48□□□□□ -0.41
VEGFA-224ENST00000523873 CAMK2BQ13554 666 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 GBX1Q14549 363 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 KLHL38Q2WGJ6 581 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 KBTBD12Q3ZCT8 623 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 FAM153CQ494X1 144 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 CCSMST1Q4G0I0 132 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 C3orf38Q5JPI3 329 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 HECTD2Q5U5R9 776 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 ZC3HC1Q86WB0 502 aaKnown RBP12.48□□□□□ -0.41
VEGFA-224ENST00000523873 SLITRK4Q8IW52 837 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 CTAGE3PQ8IX95 158 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 RBM12BQ8IXT5 1001 aaKnown RBP12.48□□□□□ -0.41
VEGFA-224ENST00000523873 OR4E2Q8NGC2 313 aa12.48□□□□□ -0.41
VEGFA-224ENST00000523873 TGM7Q96PF1 710 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms