RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 TRIM8Q9BZR9 551 aa16.63■□□□□ 0.25
UBE2D4-209ENST00000454428 SPRTNQ9H040 489 aaPredicted RBP16.63■□□□□ 0.25
UBE2D4-209ENST00000454428 RUBCNLQ9H714 662 aa16.63■□□□□ 0.25
UBE2D4-209ENST00000454428 FAM8A1Q9UBU6 413 aa16.63■□□□□ 0.25
UBE2D4-209ENST00000454428 ACSL5Q9ULC5 683 aa16.63■□□□□ 0.25
UBE2D4-209ENST00000454428 AGPSO00116 658 aa16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 CYP1A2P05177 515 aa16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 HBQ1P09105 142 aa16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 ATXN8OSP0DMR3 200 aa16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 SPAM1P38567 509 aa16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 SSR1P43307 286 aaKnown RBP16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 MYL5Q02045 173 aa16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 KLHL30Q0D2K2 578 aa16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 PRKAA1Q13131 559 aa16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 AIMP2Q13155 320 aaKnown RBP16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 ZNF169Q14929 603 aaPredicted RBP16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 SLC9A5Q14940 896 aa16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 PDK2Q15119 407 aa16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 HADHQ16836 314 aaKnown RBP16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 ZNF324BQ6AW86 544 aaPredicted RBP16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 RHBDD2Q6NTF9 364 aa16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 ACVR1CQ8NER5 493 aa16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 DNAJB14Q8TBM8 379 aa16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 PTERQ96BW5 349 aa16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 SLC6A20Q9NP91 592 aa16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 SLC22A11Q9NSA0 550 aa16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 ITGB1BP2Q9UKP3 347 aa16.62■□□□□ 0.25
UBE2D4-209ENST00000454428 GLYATL1P3A0A0U1RQE8 302 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 MATN2O00339 956 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 BUD23O43709 281 aaKnown RBP16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 PMPCBO75439 489 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 SNRPB2P08579 225 aaKnown RBP16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 SLC35G4P0C7Q5 338 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 NDUFS1P28331 727 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 TDGF1P3P51864 188 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 DCDP81605 110 aaKnown RBP16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 OTUD4Q01804 1114 aaKnown RBP16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 AP1B1Q10567 949 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 CDC16Q13042 620 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 ZIC1Q15915 447 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 PPP2R5EQ16537 467 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 B3GNTL1Q67FW5 361 aaPredicted RBP16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 ZNF295-AS1Q8N0V1 137 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 LCN9Q8WX39 176 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 RAPGEF5Q92565 580 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 RNF157Q96PX1 679 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 SRPK1Q96SB4 655 aaKnown RBP16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 C17orf62Q9BQA9 187 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 SRMSQ9H3Y6 488 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 GLOD4Q9HC38 313 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 SMOXQ9NWM0 555 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 UBP1Q9NZI7 540 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 IFT80Q9P2H3 777 aaPredicted RBP16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 DHCR7Q9UBM7 475 aaKnown RBP16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 GPN3Q9UHW5 284 aaPredicted RBP16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 FBXL4Q9UKA2 621 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 COLEC10Q9Y6Z7 277 aa16.61■□□□□ 0.25
UBE2D4-209ENST00000454428 SNRNP200O75643 2136 aaKnown RBP16.6■□□□□ 0.25
UBE2D4-209ENST00000454428 LOC285095A0A1B0GVY8 99 aa16.6■□□□□ 0.25
UBE2D4-209ENST00000454428 CCDC66A2RUB6 948 aa16.6■□□□□ 0.25
UBE2D4-209ENST00000454428 POLBP06746 335 aa16.6■□□□□ 0.25
UBE2D4-209ENST00000454428 CHRNA4P43681 627 aa16.6■□□□□ 0.25
UBE2D4-209ENST00000454428 KCNK10P57789 538 aa16.6■□□□□ 0.25
UBE2D4-209ENST00000454428 PTPRCAPQ14761 206 aa16.6■□□□□ 0.25
UBE2D4-209ENST00000454428 CYP2A13Q16696 494 aa16.6■□□□□ 0.25
UBE2D4-209ENST00000454428 LONRF2Q1L5Z9 754 aa16.6■□□□□ 0.25
UBE2D4-209ENST00000454428 DEFB110Q30KQ9 67 aa16.6■□□□□ 0.25
UBE2D4-209ENST00000454428 BCL7AQ4VC05 210 aa16.6■□□□□ 0.25
UBE2D4-209ENST00000454428 PRAMEF13Q5VWM6 474 aa16.6■□□□□ 0.25
UBE2D4-209ENST00000454428 RBM43Q6ZSC3 357 aaKnown RBP16.6■□□□□ 0.25
UBE2D4-209ENST00000454428 ADGRF3Q8IZF5 1079 aa16.6■□□□□ 0.25
UBE2D4-209ENST00000454428 LINC00615Q96LM1 132 aaPredicted RBP16.6■□□□□ 0.25
UBE2D4-209ENST00000454428 OLFM3Q96PB7 478 aa16.6■□□□□ 0.25
UBE2D4-209ENST00000454428 PCNX1Q96RV3 2341 aa16.6■□□□□ 0.25
UBE2D4-209ENST00000454428 NIPBLQ6KC79 2804 aaeCLIP16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 MYO1FO00160 1098 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 SOCS6O14544 535 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 JRKO75564 520 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 OR2B3O76000 313 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 ITGAXP20702 1163 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 CDK11BP21127 795 aaKnown RBP16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 CD68P34810 354 aaPredicted RBP16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 GSE1Q14687 1217 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 ZNF630Q2M218 657 aaPredicted RBP16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 SIRPB2Q5JXA9 342 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 ZDHHC20Q5W0Z9 365 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 KDELC1Q6UW63 502 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 NPNTQ6UXI9 565 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 BNC2Q6ZN30 1099 aaPredicted RBP16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 TRIM73Q86UV7 250 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 CFAP206Q8IYR0 622 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 GPR135Q8IZ08 494 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 CATSPER1Q8NEC5 780 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 OR52E1Q8NGJ3 308 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 PROKR1Q8TCW9 393 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 COG1Q8WTW3 980 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 CNDP1Q96KN2 507 aa16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 ZNF830Q96NB3 372 aaPredicted RBP16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 TRIM56Q9BRZ2 755 aaKnown RBP16.59■□□□□ 0.25
UBE2D4-209ENST00000454428 DEF6Q9H4E7 631 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms