RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 MSH2P43246 934 aa29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 FASLGP48023 281 aa29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 ACADVLP49748 655 aa29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 DUSP3P51452 185 aaPredicted RBP29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 PDAP1Q13442 181 aaKnown RBP29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 CHCHD2P9Q5T1J5 151 aaPredicted RBP29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 UGT3A1Q6NUS8 523 aa29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 CFAP61Q8NHU2 1237 aa29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 DCAKDQ8WVC6 231 aa29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 NFS1Q9Y697 457 aa29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 RHPN2P1A8MT19 583 aa29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 NUDT21O43809 227 aaKnown RBP29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 INHBAP08476 426 aa29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 CD9P21926 228 aa29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 SKIV2L2P42285 1042 aaKnown RBP29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 USP10Q14694 798 aaKnown RBP29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 TTLL9Q3SXZ7 439 aa29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 MROH9Q5TGP6 573 aa29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 SLC40A1Q9NP59 571 aa29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 DLL3Q9NYJ7 618 aa29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 KLHL42Q9P2K6 505 aa29.85■■■□□ 2.37
CSNK1E-206ENST00000413574 KCNK5O95279 499 aa29.84■■■□□ 2.37
CSNK1E-206ENST00000413574 CEACAM1P13688 526 aa29.84■■■□□ 2.37
CSNK1E-206ENST00000413574 SDHBP21912 280 aa29.84■■■□□ 2.37
CSNK1E-206ENST00000413574 TMEM207Q6UWW9 146 aa29.84■■■□□ 2.37
CSNK1E-206ENST00000413574 GLRX5Q86SX6 157 aa29.84■■■□□ 2.37
CSNK1E-206ENST00000413574 Q8N9G6 341 aaPredicted RBP29.84■■■□□ 2.37
CSNK1E-206ENST00000413574 EEF1AKMT1Q8WVE0 214 aa29.84■■■□□ 2.37
CSNK1E-206ENST00000413574 JPH3Q8WXH2 748 aaPredicted RBP29.84■■■□□ 2.37
CSNK1E-206ENST00000413574 FERD3LQ96RJ6 166 aa29.84■■■□□ 2.37
CSNK1E-206ENST00000413574 POT1Q9NUX5 634 aa29.84■■■□□ 2.37
CSNK1E-206ENST00000413574 ASF1AQ9Y294 204 aa29.84■■■□□ 2.37
CSNK1E-206ENST00000413574 IKBKGQ9Y6K9 419 aa29.84■■■□□ 2.37
CSNK1E-206ENST00000413574 SPTBN4Q9H254 2564 aa29.84■■■□□ 2.37
CSNK1E-206ENST00000413574 CTIFO43310 598 aaKnown RBP29.83■■■□□ 2.37
CSNK1E-206ENST00000413574 KCNA4P22459 653 aa29.83■■■□□ 2.37
CSNK1E-206ENST00000413574 POU4F1Q01851 419 aa29.83■■■□□ 2.37
CSNK1E-206ENST00000413574 OR5AR1Q8NGP9 310 aa29.83■■■□□ 2.37
CSNK1E-206ENST00000413574 SLC12A2P55011 1212 aa29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 SIM1P81133 766 aaPredicted RBP29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 PIWIL4Q7Z3Z4 852 aaKnown RBP29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 SLCO6A1Q86UG4 719 aa29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 NAT6Q93015 286 aa29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 CCDC3Q9BQI4 270 aa29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 DHRS4Q9BTZ2 278 aa29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 STN1Q9H668 368 aaKnown RBP29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 EVA1BQ9NVM1 165 aa29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 PHGDHO43175 533 aaKnown RBP29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 PRKG2Q13237 762 aa29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 GPR18Q14330 331 aa29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 KRT33BQ14525 404 aa29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 ZNF438Q7Z4V0 828 aa29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 CMC1Q7Z7K0 106 aa29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 MYRIPQ8NFW9 859 aa29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 OR6C4Q8NGE1 309 aa29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 NRTNQ99748 197 aa29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 TBC1D10AQ9BXI6 508 aa29.82■■■□□ 2.36
CSNK1E-206ENST00000413574 ALDH4A1P30038 563 aa29.81■■■□□ 2.36
CSNK1E-206ENST00000413574 ATP5DP30049 168 aa29.81■■■□□ 2.36
CSNK1E-206ENST00000413574 GMPRP36959 345 aa29.81■■■□□ 2.36
CSNK1E-206ENST00000413574 OR1D5P58170 312 aa29.81■■■□□ 2.36
CSNK1E-206ENST00000413574 ILF2Q12905 390 aaKnown RBP29.81■■■□□ 2.36
CSNK1E-206ENST00000413574 MAP9Q49MG5 647 aa29.81■■■□□ 2.36
CSNK1E-206ENST00000413574 CYHR1Q6ZMK1 362 aa29.81■■■□□ 2.36
CSNK1E-206ENST00000413574 TMEM26Q6ZUK4 368 aa29.81■■■□□ 2.36
CSNK1E-206ENST00000413574 OR2W6PQ8NHA6 318 aa29.81■■■□□ 2.36
CSNK1E-206ENST00000413574 LINGO1Q96FE5 620 aa29.81■■■□□ 2.36
CSNK1E-206ENST00000413574 SLC38A3Q99624 504 aa29.81■■■□□ 2.36
CSNK1E-206ENST00000413574 HGH1Q9BTY7 390 aa29.81■■■□□ 2.36
CSNK1E-206ENST00000413574 HEBP2Q9Y5Z4 205 aa29.81■■■□□ 2.36
CSNK1E-206ENST00000413574 TSPAN12O95859 305 aa29.8■■■□□ 2.36
CSNK1E-206ENST00000413574 STMN1P16949 149 aa29.8■■■□□ 2.36
CSNK1E-206ENST00000413574 MREGQ8N565 214 aa29.8■■■□□ 2.36
CSNK1E-206ENST00000413574 GPAMQ9HCL2 828 aa29.8■■■□□ 2.36
CSNK1E-206ENST00000413574 CIDEBQ9UHD4 219 aa29.8■■■□□ 2.36
CSNK1E-206ENST00000413574 ZNF180Q9UJW8 692 aa29.8■■■□□ 2.36
CSNK1E-206ENST00000413574 COLEC10Q9Y6Z7 277 aa29.8■■■□□ 2.36
CSNK1E-206ENST00000413574 B4GAT1O43505 415 aa29.79■■■□□ 2.36
CSNK1E-206ENST00000413574 CBSLP0DN79 551 aa29.79■■■□□ 2.36
CSNK1E-206ENST00000413574 ZNF37AP17032 561 aaPredicted RBP29.79■■■□□ 2.36
CSNK1E-206ENST00000413574 CBSP35520 551 aa29.79■■■□□ 2.36
CSNK1E-206ENST00000413574 ANKRD49Q8WVL7 239 aa29.79■■■□□ 2.36
CSNK1E-206ENST00000413574 CCDC77Q9BR77 488 aa29.79■■■□□ 2.36
CSNK1E-206ENST00000413574 UNC13CQ8NB66 2214 aa29.79■■■□□ 2.36
CSNK1E-206ENST00000413574 MATN4O95460 622 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 FTH1P19P0C7X4 201 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 ENO3P13929 434 aaPredicted RBP29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 IL2P60568 153 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 ZKSCAN8Q15776 578 aaPredicted RBP29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 ADGRD1Q6QNK2 874 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 SPRED1Q7Z699 444 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 AVL9Q8NBF6 648 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 OR5K2Q8NHB8 316 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 SH3KBP1Q96B97 665 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 TSPAN17Q96FV3 270 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 TRIT1Q9H3H1 467 aaKnown RBP29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 MVB12BQ9H7P6 319 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 CTNNAL1Q9UBT7 734 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 SLC24A2Q9UI40 661 aa29.78■■■□□ 2.36
CSNK1E-206ENST00000413574 TDRKHQ9Y2W6 561 aaKnown RBP29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms