RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 ERGIC3Q9Y282 383 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 VWA7Q9Y334 891 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 NDUFAF1Q9Y375 327 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 ACTL7AQ9Y615 435 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 KRBA1A5PL33 1030 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 PABPN1LA6NDY0 278 aaKnown RBP8.96□□□□□ -0.97
TOP1-201ENST00000361337 NCAM2O15394 837 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 SNAP91O60641 907 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 HTR1AP08908 422 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 HSD17B1P14061 328 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 PRDX3P30048 256 aaKnown RBP8.96□□□□□ -0.97
TOP1-201ENST00000361337 HLCSP50747 726 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 DEFA1P59665 94 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 DEFA3P59666 94 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 KCNC4Q03721 635 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 LIPEQ05469 1076 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 SCAPQ12770 1279 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 SMUG1Q53HV7 270 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 AGAP9Q5VTM2 703 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 CRTC3Q6UUV7 619 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 PTGR2Q8N8N7 351 aaPredicted RBP8.96□□□□□ -0.97
TOP1-201ENST00000361337 FAR1Q8WVX9 515 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 STARD8Q92502 1023 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 PHF21AQ96BD5 680 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 ARPC5LQ9BPX5 153 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 ALG2Q9H553 416 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 NTN4Q9HB63 628 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 GLOD4Q9HC38 313 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 HCFC1R1Q9NWW0 138 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 POLG2Q9UHN1 485 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 DNMT3LQ9UJW3 386 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 UTS2RQ9UKP6 389 aa8.96□□□□□ -0.97
TOP1-201ENST00000361337 TSC2P49815 1807 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 C2orf78A6NCI8 922 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 OR6C75A6NL08 312 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 SLC38A8A6NNN8 435 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 CACNG3O60359 315 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 MAFKO60675 156 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 GUCY1B2O75343 617 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 PRSS56P0CW18 603 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 PABPC1P11940 636 aaKnown RBP8.96□□□□□ -0.98
TOP1-201ENST00000361337 HLA-DPA1P20036 260 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 ITGB8P26012 769 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 CD86P42081 329 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 PLA2G16P53816 162 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 GTF2H3Q13889 308 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 OR4D1Q15615 310 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 PFKFB4Q16877 469 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 ZFP69Q49AA0 526 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 CCDC149Q6ZUS6 474 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 LINC00523Q86TU6 105 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 HS6ST3Q8IZP7 471 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 PGBD3Q8N328 593 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 MINDY1Q8N5J2 469 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 LPCAT1Q8NF37 534 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 OR13J1Q8NGT2 312 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 NTAN1Q96AB6 310 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 TRIM43Q96BQ3 446 aaPredicted RBP8.96□□□□□ -0.98
TOP1-201ENST00000361337 MTERF3Q96E29 417 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 FAR2Q96K12 515 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 CINPQ9BW66 212 aaPredicted RBP8.96□□□□□ -0.98
TOP1-201ENST00000361337 EMILIN2Q9BXX0 1053 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 SLC39A8Q9C0K1 460 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 YIPF1Q9Y548 306 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 HTTP42858 3142 aa8.96□□□□□ -0.98
TOP1-201ENST00000361337 LCHNA4D1U4 455 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 CPNE6O95741 557 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 LAG3P18627 525 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 FSHRP23945 695 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 ZFP36L2P47974 494 aaKnown RBP8.95□□□□□ -0.98
TOP1-201ENST00000361337 OR4D2P58180 307 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 RHOAP61586 193 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 CLCQ05315 142 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 PPIGQ13427 754 aaKnown RBP eCLIP8.95□□□□□ -0.988e-7■□□□□ 9.1
TOP1-201ENST00000361337 NFYCQ13952 458 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 TAB1Q15750 504 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 DPY19L1Q2PZI1 675 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 FRA10AC1Q70Z53 315 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 R3HCC1LQ7Z5L2 792 aaKnown RBP8.95□□□□□ -0.98
TOP1-201ENST00000361337 GRASPQ7Z6J2 395 aaPredicted RBP8.95□□□□□ -0.98
TOP1-201ENST00000361337 FAM86B1Q8N7N1 296 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 SMG7Q92540 1137 aaKnown RBP8.95□□□□□ -0.98
TOP1-201ENST00000361337 ESAMQ96AP7 390 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 BIRC7Q96CA5 298 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 FAM124BQ9H5Z6 455 aaPredicted RBP8.95□□□□□ -0.98
TOP1-201ENST00000361337 DNMT3BQ9UBC3 853 aaKnown RBP8.95□□□□□ -0.98
TOP1-201ENST00000361337 IKZF3Q9UKT9 509 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 EP300Q09472 2414 aaPredicted RBP8.95□□□□□ -0.98
TOP1-201ENST00000361337 A0A0U1RQS6 177 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 NEDD8-MDP1E9PL57 170 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 MEN1O00255 615 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 SEC14L2O76054 403 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 PRLP01236 227 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 HOXD8P13378 290 aaPredicted RBP8.95□□□□□ -0.98
TOP1-201ENST00000361337 CTPS1P17812 591 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 AGXTP21549 392 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 NNMTP40261 264 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 UFM1P61960 85 aa8.95□□□□□ -0.98
TOP1-201ENST00000361337 TIAL1Q01085 375 aaKnown RBP eCLIP8.95□□□□□ -0.983e-7■■■■□ 20.4
TOP1-201ENST00000361337 VAC14Q08AM6 782 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms