RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 TRNAU1APQ9NX07 287 aaKnown RBP4.94□□□□□ -1.62
LINC00397-202ENST00000606785 CNIH4Q9P003 139 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 TBC1D7Q9P0N9 293 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 ITGA11Q9UKX5 1188 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 RNF150Q9ULK6 438 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 ABT1Q9ULW3 272 aaKnown RBP4.94□□□□□ -1.62
LINC00397-202ENST00000606785 PADI2Q9Y2J8 665 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 COX11Q9Y6N1 276 aa4.94□□□□□ -1.62
LINC00397-202ENST00000606785 A0A1W2PRV1 198 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 RGS14O43566 566 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 SPRY3O43610 288 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 RTN2O75298 545 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 PNPP00491 289 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 TCF4P15884 667 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 KELP23276 732 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 ACAT1P24752 427 aaKnown RBP4.93□□□□□ -1.62
LINC00397-202ENST00000606785 TNFRSF8P28908 595 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 TKTP29401 623 aaKnown RBP4.93□□□□□ -1.62
LINC00397-202ENST00000606785 SOAT1P35610 550 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 BPIFB3P59826 476 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 GPS2Q13227 327 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 RBMS2Q15434 407 aaKnown RBP4.93□□□□□ -1.62
LINC00397-202ENST00000606785 CDO1Q16878 200 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 ZNF449Q6P9G9 518 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 PRAG1Q86YV5 1406 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 OTUD6BQ8N6M0 293 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 ZNF611Q8N823 705 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 OR7G3Q8NG95 312 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 HEXDCQ8WVB3 486 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 SMPDL3BQ92485 455 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 ATP6V0A1Q93050 837 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 SLC25A28Q96A46 364 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 MOB3AQ96BX8 217 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 PDLIM5Q96HC4 596 aaKnown RBP4.93□□□□□ -1.62
LINC00397-202ENST00000606785 NLRP4Q96MN2 994 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 ZNF582Q96NG8 517 aaPredicted RBP4.93□□□□□ -1.62
LINC00397-202ENST00000606785 ATP6V0BQ99437 205 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 SLA2Q9H6Q3 261 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 VPS18Q9P253 973 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 AGO1Q9UL18 857 aaKnown RBP4.93□□□□□ -1.62
LINC00397-202ENST00000606785 FZD10Q9ULW2 581 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 FRMD4BQ9Y2L6 1034 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 PTPRCP08575 1304 aa4.93□□□□□ -1.62
LINC00397-202ENST00000606785 TAF1P21675 1872 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 PRSS51A0A1B0GVH4 220 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 RPS10-NUDT3A0A1W2PQS6 291 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 DVL1O14640 695 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 GAGE7O76087 117 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 GCNT3O95395 438 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 SYF2O95926 243 aaKnown RBP4.92□□□□□ -1.62
LINC00397-202ENST00000606785 FGBP02675 491 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 RLN1P04808 185 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 CELA2AP08217 269 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 PLA2G4BP0C869 781 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 GAGE12FP0CL80 117 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 GAGE12GP0CL81 117 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 GAGE12IP0CL82 117 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 PRF1P14222 555 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 CD22P20273 847 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 TNFRSF1BP20333 461 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 LMO1P25800 156 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 C21orf33P30042 268 aaPredicted RBP4.92□□□□□ -1.62
LINC00397-202ENST00000606785 TIA1P31483 386 aaKnown RBP eCLIP4.92□□□□□ -1.62
LINC00397-202ENST00000606785 WNT5AP41221 380 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 CASP3P42574 277 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 KCNJ1P48048 391 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 AMTP48728 403 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 LHX1P48742 406 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 SNU13P55769 128 aaKnown RBP4.92□□□□□ -1.62
LINC00397-202ENST00000606785 PTENP60484 403 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 GAGE1Q13065 139 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 GAGE4Q13068 117 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 PLA2G7Q13093 441 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 RPA4Q13156 261 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 LASP1Q14847 261 aaKnown RBP4.92□□□□□ -1.62
LINC00397-202ENST00000606785 PRTGQ2VWP7 1150 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 CCDC158Q5M9N0 1113 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 TMEM182Q6ZP80 229 aaPredicted RBP4.92□□□□□ -1.62
LINC00397-202ENST00000606785 TMPRSS11FQ6ZWK6 438 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 Q75L30 129 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 ZNF548Q8NEK5 533 aaPredicted RBP4.92□□□□□ -1.62
LINC00397-202ENST00000606785 NSMAFQ92636 917 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 RAD54LQ92698 747 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 ST6GALNAC6Q969X2 333 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 MTERF3Q96E29 417 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 PCYT2Q99447 389 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 SLX1AQ9BQ83 275 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 LMF2Q9BU23 707 aaKnown RBP4.92□□□□□ -1.62
LINC00397-202ENST00000606785 SLC5A7Q9GZV3 580 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 ZBTB40Q9NUA8 1239 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 OSER1Q9NX31 292 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 NPAP1Q9NZP6 1156 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 C1RLQ9NZP8 487 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 MOSPD1Q9UJG1 213 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 PRDM4Q9UKN5 801 aa4.92□□□□□ -1.62
LINC00397-202ENST00000606785 ISY1Q9ULR0 285 aaKnown RBP4.92□□□□□ -1.62
LINC00397-202ENST00000606785 YDJCA8MPS7 323 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 C19orf81C9J6K1 198 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 RTCAO00442 366 aaKnown RBP4.91□□□□□ -1.62
LINC00397-202ENST00000606785 AP5Z1O43299 807 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms