RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 RASSF9O75901 435 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 WT1P19544 449 aaPredicted RBP21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 MGAT1P26572 445 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 COILP38432 576 aaPredicted RBP21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 MAGEA6P43360 314 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 CD151P48509 253 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 VPS41P49754 854 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 TERF1P54274 439 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 RPA4Q13156 261 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 MANEAQ5SRI9 462 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 CEACAM20Q6UY09 585 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 LDB1Q86U70 411 aaPredicted RBP21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 ACTRT1Q8TDG2 376 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 NRTNQ99748 197 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 IL22Q9GZX6 179 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 HRASLS2Q9NWW9 162 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 SYBUQ9NX95 663 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 BFARQ9NZS9 450 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 MARCH4Q9P2E8 410 aaPredicted RBP21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 PILRAQ9UKJ1 303 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 PCDHB11Q9Y5F2 797 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 HEBP2Q9Y5Z4 205 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 COLEC10Q9Y6Z7 277 aa21.75■■□□□ 1.07
GTF2F1-204ENST00000594965 MGAQ8IWI9 3026 aa21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 IGHV5-51A0A0C4DH38 117 aa21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 PGRMC1O00264 195 aaKnown RBP21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 QSOX1O00391 747 aa21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 ZNF185O15231 689 aa21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 NDUFS1P28331 727 aa21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 PRAMEP78395 509 aa21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 CDK16Q00536 496 aa21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 GPS1Q13098 491 aa21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 FASTKD1Q53R41 847 aaKnown RBP21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 ANKRD22Q5VYY1 191 aa21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 KLHL35Q6PF15 583 aa21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 NAPRTQ6XQN6 538 aa21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 CERS6Q6ZMG9 384 aa21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 PHC3Q8NDX5 983 aa21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 FERD3LQ96RJ6 166 aa21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 MAP3K3Q99759 626 aa21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 KIFC1Q9BW19 673 aa21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 SNX12Q9UMY4 172 aa21.74■■□□□ 1.07
GTF2F1-204ENST00000594965 SLC5A10A0PJK1 596 aa21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 OR6C74A6NCV1 312 aa21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 AP3B1O00203 1094 aa21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 LIN7AO14910 233 aaPredicted RBP21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 POLR1CO15160 346 aaPredicted RBP21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 ATXN7O15265 892 aaPredicted RBP21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 KIF5CO60282 957 aa21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 RAD1O60671 282 aa21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 FTH1P02794 183 aa21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 OR56A5P0C7T3 313 aa21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 NELFEP18615 380 aaKnown RBP21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 KIAA1614Q5VZ46 1190 aa21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 CCDC137Q6PK04 289 aaKnown RBP21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 TIPARPQ7Z3E1 657 aaKnown RBP21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 OOSP2Q86WS3 158 aa21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 ACVR1CQ8NER5 493 aa21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 CPT1BQ92523 772 aa21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 ELMO1Q92556 727 aa21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 TTC9Q92623 222 aa21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 MFSD3Q96ES6 412 aa21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 SLC41A2Q96JW4 573 aa21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 ZPBPQ9BS86 351 aa21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 MRM3Q9HC36 420 aaKnown RBP21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 TMEM184BQ9Y519 407 aaPredicted RBP21.73■■□□□ 1.07
GTF2F1-204ENST00000594965 IFRD1O00458 451 aaPredicted RBP21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 AVILO75366 819 aa21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 TMEM63AO94886 807 aa21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 ARNTP27540 789 aa21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 ACADLP28330 430 aa21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 RHDQ02161 417 aa21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 FOXM1Q08050 763 aa21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 BOP1Q14137 746 aaKnown RBP21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 BRD3Q15059 726 aa21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 CES3Q6UWW8 571 aa21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 CAND1Q86VP6 1230 aaKnown RBP21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 OR4E2Q8NGC2 313 aa21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 LKAAEAR1Q8TD35 194 aa21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 UBXN4Q92575 508 aa21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 TFGQ92734 400 aaPredicted RBP21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 PPM1MQ96MI6 270 aa21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 OR6C1Q96RD1 312 aa21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 NAP1L3Q99457 506 aaPredicted RBP21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 TTC1Q99614 292 aa21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 CATSPERZQ9NTU4 200 aa21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 SOX13Q9UN79 622 aa21.72■■□□□ 1.07
GTF2F1-204ENST00000594965 BHMG1C9JSJ3 638 aaPredicted RBP21.71■■□□□ 1.07
GTF2F1-204ENST00000594965 CES2O00748 559 aa21.71■■□□□ 1.07
GTF2F1-204ENST00000594965 CD3EAPO15446 510 aaKnown RBP21.71■■□□□ 1.07
GTF2F1-204ENST00000594965 PHF2O75151 1096 aa21.71■■□□□ 1.07
GTF2F1-204ENST00000594965 DLGAP3O95886 979 aa21.71■■□□□ 1.07
GTF2F1-204ENST00000594965 ARCN1P48444 511 aaKnown RBP21.71■■□□□ 1.07
GTF2F1-204ENST00000594965 ATP1A2P50993 1020 aa21.71■■□□□ 1.07
GTF2F1-204ENST00000594965 KPNA2P52292 529 aaKnown RBP21.71■■□□□ 1.07
GTF2F1-204ENST00000594965 KRT33BQ14525 404 aa21.71■■□□□ 1.07
GTF2F1-204ENST00000594965 DNTTIP2Q5QJE6 756 aaKnown RBP21.71■■□□□ 1.07
GTF2F1-204ENST00000594965 CACNA2D3Q8IZS8 1091 aa21.71■■□□□ 1.07
GTF2F1-204ENST00000594965 MPP5Q8N3R9 675 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms