RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 MTHFD1P11586 935 aaKnown RBP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 FGF5P12034 268 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 NELFEP18615 380 aaKnown RBP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 MSH3P20585 1137 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 AKT1P31749 480 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 DEKP35659 375 aaKnown RBP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 NAP1L1P55209 391 aaKnown RBP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 RWDD2BP57060 319 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 MRPL49Q13405 166 aaKnown RBP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 SPARCL1Q14515 664 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 INPP5JQ15735 1006 aaPredicted RBP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 PRR30Q53SZ7 412 aaPredicted RBP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 CPZQ66K79 652 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 DARS2Q6PI48 645 aaKnown RBP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 KLHDC8BQ8IXV7 354 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 LILRA3Q8N6C8 439 aaPredicted RBP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 SPDYE1Q8NFV5 336 aaPredicted RBP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 PRR7Q8TB68 274 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 ZDHHC12Q96GR4 267 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 SPATA13Q96N96 652 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 INSM2Q96T92 566 aaPredicted RBP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 WWP1Q9H0M0 922 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 ASB8Q9H765 288 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 MLXIPLQ9NP71 852 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 LHX9Q9NQ69 397 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 IMP3Q9NV31 184 aaKnown RBP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 AAR2Q9Y312 384 aaKnown RBP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 PCDHGA9Q9Y5G4 932 aaKnown RBP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 C21orf140B9A014 251 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 CCL22O00626 93 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 MT-ND3P03897 115 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 FOLR1P15328 257 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 VAV2P52735 878 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 ZNF140P52738 457 aaPredicted RBP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 TMPRSS15P98073 1019 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 CHAF1BQ13112 559 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 KCNAB1Q14722 419 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 UGT8Q16880 541 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 LONRF2Q1L5Z9 754 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 BCL7AQ4VC05 210 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 CERS6Q6ZMG9 384 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 PPP1R3BQ86XI6 285 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 TICAM1Q8IUC6 712 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 TMEM139Q8IV31 216 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 OR2L2Q8NH16 312 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 THAP4Q8WY91 577 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 SLC41A2Q96JW4 573 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 CALR3Q96L12 384 aaKnown RBP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 MAP3K3Q99759 626 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 TBL1YQ9BQ87 522 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 FAM96AQ9H5X1 160 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 ARNT2Q9HBZ2 717 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 IGSF5Q9NSI5 407 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 FAM8A1Q9UBU6 413 aa11.57□□□□□ -0.56
GABPB1-206ENST00000543881 PACSIN2Q9UNF0 486 aaPredicted RBP11.57□□□□□ -0.56
GABPB1-206ENST00000543881 LDB2O43679 373 aa11.56□□□□□ -0.56
GABPB1-206ENST00000543881 TJP3O95049 919 aa11.56□□□□□ -0.56
GABPB1-206ENST00000543881 METTL18O95568 372 aa11.56□□□□□ -0.56
GABPB1-206ENST00000543881 CDKN1CP49918 316 aaPredicted RBP11.56□□□□□ -0.56
GABPB1-206ENST00000543881 CCL11P51671 97 aa11.56□□□□□ -0.56
GABPB1-206ENST00000543881 PRPSAP1Q14558 356 aa11.56□□□□□ -0.56
GABPB1-206ENST00000543881 KCTD11Q693B1 232 aa11.56□□□□□ -0.56
GABPB1-206ENST00000543881 GAS2L3Q86XJ1 694 aa11.56□□□□□ -0.56
GABPB1-206ENST00000543881 SEC14L1Q92503 715 aa11.56□□□□□ -0.56
GABPB1-206ENST00000543881 ZNF514Q96K75 400 aaPredicted RBP11.56□□□□□ -0.56
GABPB1-206ENST00000543881 LINC00615Q96LM1 132 aaPredicted RBP11.56□□□□□ -0.56
GABPB1-206ENST00000543881 RMDN2Q96LZ7 410 aa11.56□□□□□ -0.56
GABPB1-206ENST00000543881 C12orf66Q96MD2 445 aa11.56□□□□□ -0.56
GABPB1-206ENST00000543881 RUFY1Q96T51 708 aa11.56□□□□□ -0.56
GABPB1-206ENST00000543881 FERMT1Q9BQL6 677 aa11.56□□□□□ -0.56
GABPB1-206ENST00000543881 SLC29A3Q9BZD2 475 aa11.56□□□□□ -0.56
GABPB1-206ENST00000543881 ACSS2Q9NR19 701 aa11.56□□□□□ -0.56
GABPB1-206ENST00000543881 LUZP4Q9P127 313 aa11.56□□□□□ -0.56
GABPB1-206ENST00000543881 MAP10Q9P2G4 905 aa11.56□□□□□ -0.56
GABPB1-206ENST00000543881 R3HDM2Q9Y2K5 976 aaKnown RBP11.56□□□□□ -0.56
GABPB1-206ENST00000543881 TCRBV7S2A1N4TA0A589 114 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 OR5K3A6NET4 321 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 WIPF3A6NGB9 483 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 ARGFXA6NJG6 315 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 DDX3YO15523 660 aaKnown RBP11.55□□□□□ -0.56
GABPB1-206ENST00000543881 STK10O94804 968 aaKnown RBP11.55□□□□□ -0.56
GABPB1-206ENST00000543881 IPO7O95373 1038 aaKnown RBP11.55□□□□□ -0.56
GABPB1-206ENST00000543881 CRTAMO95727 393 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 POLBP06746 335 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 EBLN1P0CF75 366 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 PRSS56P0CW18 603 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 TNFRSF8P28908 595 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 PTPN4P29074 926 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 RPS18P62269 152 aaKnown RBP11.55□□□□□ -0.56
GABPB1-206ENST00000543881 KLF1Q13351 362 aaPredicted RBP11.55□□□□□ -0.56
GABPB1-206ENST00000543881 PLCL1Q15111 1095 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 ZNF658BQ4V348 819 aaPredicted RBP11.55□□□□□ -0.56
GABPB1-206ENST00000543881 PAPD7Q5XG87 772 aaKnown RBP11.55□□□□□ -0.56
GABPB1-206ENST00000543881 PWWP2BQ6NUJ5 590 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 JMJD6Q6NYC1 403 aaPredicted RBP11.55□□□□□ -0.56
GABPB1-206ENST00000543881 FAM199XQ6PEV8 388 aaPredicted RBP11.55□□□□□ -0.56
GABPB1-206ENST00000543881 CFAP206Q8IYR0 622 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 NXPE1Q8N323 547 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 FAM71DQ8N9W8 422 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms