RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 RASGEF1CQ8N431 466 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 OR1J1Q8NGS3 322 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 OR6S1Q8NH40 331 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 ZCCHC10Q8TBK6 192 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 NPRL2Q8WTW4 380 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 SMAP2Q8WU79 429 aaPredicted RBP0.6□□□□□ -2.31
COPB1-212ENST00000534771 CHPT1Q8WUD6 406 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 RILPL2Q969X0 211 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 PHYHIPLQ96FC7 376 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 CALML4Q96GE6 196 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 C8orf48Q96LL4 319 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 SGK494Q96LW2 274 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 KLHL15Q96M94 604 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 PHF7Q9BWX1 381 aaPredicted RBP0.6□□□□□ -2.31
COPB1-212ENST00000534771 TEX13BQ9BXU2 312 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 ZNF700Q9H0M5 742 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 RANBP17Q9H2T7 1088 aaKnown RBP0.6□□□□□ -2.31
COPB1-212ENST00000534771 TTYH1Q9H313 450 aaPredicted RBP0.6□□□□□ -2.31
COPB1-212ENST00000534771 DENND2DQ9H6A0 471 aaPredicted RBP0.6□□□□□ -2.31
COPB1-212ENST00000534771 ASB8Q9H765 288 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 PRKRIP1Q9H875 184 aaPredicted RBP0.6□□□□□ -2.31
COPB1-212ENST00000534771 MED20Q9H944 212 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 SLC28A3Q9HAS3 691 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 ASAH2Q9NR71 780 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 SLC6A13Q9NSD5 602 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 NDE1Q9NXR1 346 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 RCC2Q9P258 522 aaKnown RBP0.6□□□□□ -2.31
COPB1-212ENST00000534771 COPG2Q9UBF2 871 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 GRHPRQ9UBQ7 328 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 CNOT7Q9UIV1 285 aaKnown RBP0.6□□□□□ -2.31
COPB1-212ENST00000534771 FEM1BQ9UK73 627 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 TSPAN16Q9UKR8 245 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 PLCL2Q9UPR0 1127 aa0.6□□□□□ -2.31
COPB1-212ENST00000534771 LOC101059948A0A1B0GTJ6 334 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 MED19A0JLT2 244 aaPredicted RBP0.59□□□□□ -2.31
COPB1-212ENST00000534771 TRIM49BA6NDI0 452 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 SHISA9B4DS77 424 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 J3QR06 171 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 SNAP23O00161 211 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 TFECO14948 347 aaPredicted RBP0.59□□□□□ -2.31
COPB1-212ENST00000534771 DFFBO76075 338 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 SEC31AO94979 1220 aaKnown RBP0.59□□□□□ -2.31
COPB1-212ENST00000534771 THY1P04216 161 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 KRT18P05783 430 aaKnown RBP0.59□□□□□ -2.31
COPB1-212ENST00000534771 HRH2P25021 359 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 PSMC4P43686 418 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 TSFMP43897 325 aaKnown RBP0.59□□□□□ -2.31
COPB1-212ENST00000534771 PAPOLAP51003 745 aaKnown RBP0.59□□□□□ -2.31
COPB1-212ENST00000534771 PRKCZQ05513 592 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 PRKAA1Q13131 559 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 PRKG1Q13976 671 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 POSTNQ15063 836 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 ZNF79Q15937 498 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 SLC9B1Q4ZJI4 515 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 ZNF805Q5CZA5 627 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 C20orf194Q5TEA3 1177 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 CDHR3Q6ZTQ4 885 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 HAUS6Q7Z4H7 955 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 ADGRD2Q7Z7M1 963 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 CCDC190Q86UF4 302 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 KIRREL3Q8IZU9 778 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 C11orf42Q8N5U0 333 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 CD177Q8N6Q3 437 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 MAPKAPK5-AS1Q8N8E1 139 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 GOLGA6L2Q8N9W4 650 aaPredicted RBP0.59□□□□□ -2.31
COPB1-212ENST00000534771 AQP11Q8NBQ7 271 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 OLIG1Q8TAK6 271 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 MAPK15Q8TD08 544 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 RRNAD1Q96FB5 475 aaKnown RBP0.59□□□□□ -2.31
COPB1-212ENST00000534771 CRB3Q9BUF7 120 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 KIF9Q9HAQ2 790 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 GPN1Q9HCN4 374 aaPredicted RBP0.59□□□□□ -2.31
COPB1-212ENST00000534771 MYOZ2Q9NPC6 264 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 B3GAT2Q9NPZ5 323 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 MBNL1Q9NR56 388 aaKnown RBP0.59□□□□□ -2.31
COPB1-212ENST00000534771 MIOSQ9NXC5 875 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 PPP1R14DQ9NXH3 145 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 MPP6Q9NZW5 540 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 ADAM22Q9P0K1 906 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 SLC25A10Q9UBX3 287 aaPredicted RBP0.59□□□□□ -2.31
COPB1-212ENST00000534771 WBP11Q9Y2W2 641 aaKnown RBP0.59□□□□□ -2.31
COPB1-212ENST00000534771 TMEM184BQ9Y519 407 aaPredicted RBP0.59□□□□□ -2.31
COPB1-212ENST00000534771 STYXL1Q9Y6J8 313 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 MAU2Q9Y6X3 613 aa0.59□□□□□ -2.31
COPB1-212ENST00000534771 ABHD14A-ACY1A0A1B0GW23 586 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 A0A1W2PRB8 838 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 FAM168BA1KXE4 195 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 ELOVL7A1L3X0 281 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 TCP11X1B4DZS4 312 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 E9PI62 339 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 PI4K2BG5E9Z4 385 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 TMEM189-UBE2V1I3L0A0 370 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 HDAC3O15379 428 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 PHF1O43189 567 aaPredicted RBP0.58□□□□□ -2.32
COPB1-212ENST00000534771 PLPP2O43688 288 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 ZNF217O75362 1048 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 LRCH4O75427 683 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 IGHEP01854 428 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 C9P02748 559 aa0.58□□□□□ -2.32
COPB1-212ENST00000534771 ICAM1P05362 532 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms