RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 GLE1Q53GS7 698 aaKnown RBP12.53□□□□□ -0.4
VEGFA-224ENST00000523873 TEX35Q5T0J7 233 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 TEDDM1Q5T9Z0 273 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 TMEM26Q6ZUK4 368 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 B3GNT8Q7Z7M8 397 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 LRRC6Q86X45 466 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 PALM2Q8IXS6 379 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 FERD3LQ96RJ6 166 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 GFM1Q96RP9 751 aaKnown RBP12.53□□□□□ -0.4
VEGFA-224ENST00000523873 NDNQ99608 321 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 SLC30A3Q99726 388 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 NUDT22Q9BRQ3 303 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 FOXP3Q9BZS1 431 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 INTS10Q9NVR2 710 aaKnown RBP12.53□□□□□ -0.4
VEGFA-224ENST00000523873 TMEM9Q9P0T7 183 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 CLCA2Q9UQC9 943 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 CDYLQ9Y232 598 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 PCDHB1Q9Y5F3 818 aa12.53□□□□□ -0.4
VEGFA-224ENST00000523873 IGHV1OR21-1A0A087WYE8 117 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 KLHL33A6NCF5 533 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 D6RAR5 112 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 LIN7AO14910 233 aaPredicted RBP12.52□□□□□ -0.41
VEGFA-224ENST00000523873 PFDN6O15212 129 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 ESR1P03372 595 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 GSTM1P09488 218 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 CDK4P11802 303 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 HOXB3P14651 431 aaPredicted RBP12.52□□□□□ -0.41
VEGFA-224ENST00000523873 TYRP1P17643 537 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 CD1CP29017 333 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 MAGEA4P43358 317 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 LEPRP48357 1165 aaKnown RBP12.52□□□□□ -0.41
VEGFA-224ENST00000523873 PGGT1BP53609 377 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 GSTM4Q03013 218 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 MGAT5Q09328 741 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 MAP9Q49MG5 647 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 RBM20Q5T481 1227 aaKnown RBP12.52□□□□□ -0.41
VEGFA-224ENST00000523873 RBM44Q6ZP01 1051 aaKnown RBP12.52□□□□□ -0.41
VEGFA-224ENST00000523873 PDZD3Q86UT5 571 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 TMPRSS12Q86WS5 348 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 CNTN4Q8IWV2 1026 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 LMNTD2Q8IXW0 634 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 TMEM159Q96B96 161 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 ATXN7L3BQ96GX2 97 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 PANX3Q96QZ0 392 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 TSSK1BQ9BXA7 367 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 ZMYND15Q9H091 742 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 SLC40A1Q9NP59 571 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 MOCS1Q9NZB8 636 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 OGFRQ9NZT2 677 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 RUVBL2Q9Y230 463 aaKnown RBP12.52□□□□□ -0.41
VEGFA-224ENST00000523873 MED16Q9Y2X0 877 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 PSAT1Q9Y617 370 aa12.52□□□□□ -0.41
VEGFA-224ENST00000523873 LILRA5A6NI73 299 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 CXorf49A8MYA2 514 aaPredicted RBP12.51□□□□□ -0.41
VEGFA-224ENST00000523873 E5RI56 91 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 F8W8V4 182 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 IFRD1O00458 451 aaPredicted RBP12.51□□□□□ -0.41
VEGFA-224ENST00000523873 GPC4O75487 556 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 AHSGP02765 367 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 APOA4P06727 396 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 CHRM3P20309 590 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 ACADLP28330 430 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 GPR3P46089 330 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 ADARP55265 1226 aaKnown RBP12.51□□□□□ -0.41
VEGFA-224ENST00000523873 ABRQ12979 859 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 RPA4Q13156 261 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 CUL1Q13616 776 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 KRT33BQ14525 404 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 EFTUD2Q15029 972 aaKnown RBP eCLIP12.51□□□□□ -0.414e-10■■■■■ 38.6
VEGFA-224ENST00000523873 ISXQ2M1V0 245 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 ZNF449Q6P9G9 518 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 ZNF574Q6ZN55 896 aaPredicted RBP12.51□□□□□ -0.41
VEGFA-224ENST00000523873 GSPT2Q8IYD1 628 aaKnown RBP12.51□□□□□ -0.41
VEGFA-224ENST00000523873 SLC22A15Q8IZD6 547 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 GALNT15Q8N3T1 639 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 DCBLD1Q8N8Z6 715 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 SIDT2Q8NBJ9 832 aaKnown RBP12.51□□□□□ -0.41
VEGFA-224ENST00000523873 OR5AR1Q8NGP9 310 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 CFAP61Q8NHU2 1237 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 GIMAP7Q8NHV1 300 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 RSC1A1Q92681 617 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 SH3KBP1Q96B97 665 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 AHCYL2Q96HN2 611 aaKnown RBP12.51□□□□□ -0.41
VEGFA-224ENST00000523873 DEPDC7Q96QD5 511 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 AARSD1Q9BTE6 412 aaKnown RBP12.51□□□□□ -0.41
VEGFA-224ENST00000523873 HGH1Q9BTY7 390 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 CCDC68Q9H2F9 335 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 SEMA6CQ9H3T2 930 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 LRRC4CQ9HCJ2 640 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 ZFATQ9P243 1243 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 CIDEBQ9UHD4 219 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 NFU1Q9UMS0 254 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 VPS9D1Q9Y2B5 631 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 ENTPD2Q9Y5L3 495 aa12.51□□□□□ -0.41
VEGFA-224ENST00000523873 TCRBV9S1A1TA0A576 114 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 PMS2P1A4D2B8 440 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 H3BMM5 538 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 CPNE6O95741 557 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 CD151P48509 253 aa12.5□□□□□ -0.41
VEGFA-224ENST00000523873 CLCN7P51798 805 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms