RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 LAMA3Q16787 3333 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 A0A0J9YYE9 177 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 A0A1W2PPC1 479 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 A0A1W2PQ67 120 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 CCL22O00626 93 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 GFAPP14136 432 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 HNRNPLP14866 589 aaKnown RBP eCLIP18.02■□□□□ 0.481e-6■■□□□ 12
SDC2-202ENST00000518385 LBPP18428 481 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 FSHRP23945 695 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 TPP2P29144 1249 aaPredicted RBP18.02■□□□□ 0.48
SDC2-202ENST00000518385 HMGCLP35914 325 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 PTPN5P54829 565 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 SNRPD1P62314 119 aaKnown RBP18.02■□□□□ 0.48
SDC2-202ENST00000518385 RALGDSQ12967 914 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 C16orf72Q14CZ0 275 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 CERS6Q6ZMG9 384 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 ADGRG5Q8IZF4 528 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 AADATQ8N5Z0 425 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 TRUB1Q8WWH5 349 aaKnown RBP18.02■□□□□ 0.48
SDC2-202ENST00000518385 BCL7BQ9BQE9 202 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 NUSAP1Q9BXS6 441 aaKnown RBP18.02■□□□□ 0.48
SDC2-202ENST00000518385 CEP44Q9C0F1 390 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 TFB2MQ9H5Q4 396 aaKnown RBP18.02■□□□□ 0.48
SDC2-202ENST00000518385 SDR39U1Q9NRG7 319 aaPredicted RBP18.02■□□□□ 0.48
SDC2-202ENST00000518385 HS3ST2Q9Y278 367 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 CRYL1Q9Y2S2 319 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 PCDHB9Q9Y5E1 797 aa18.02■□□□□ 0.48
SDC2-202ENST00000518385 C2orf16Q68DN1 1984 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 GOLGA8CPA6NN73 597 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 DLGAP1O14490 977 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 MT-CO1P00395 513 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 ENTPD1P49961 510 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 C21orf59P57076 290 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 SEMA3AQ14563 771 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 PTPRCAPQ14761 206 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 FXNQ16595 210 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 CYP2R1Q6VVX0 501 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 TPGS1Q6ZTW0 290 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 LDB1Q86U70 411 aaPredicted RBP18.01■□□□□ 0.47
SDC2-202ENST00000518385 SLC15A3Q8IY34 581 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 MINDY2Q8NBR6 621 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 PIH1D2Q8WWB5 315 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 IL17CQ9P0M4 197 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 ZNF711Q9Y462 761 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 FADS3Q9Y5Q0 445 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 ANKRD36A6QL64 1941 aa18.01■□□□□ 0.47
SDC2-202ENST00000518385 UBXN8O00124 270 aa18■□□□□ 0.47
SDC2-202ENST00000518385 NME4O00746 187 aa18■□□□□ 0.47
SDC2-202ENST00000518385 TULP3O75386 442 aa18■□□□□ 0.47
SDC2-202ENST00000518385 HPRP00739 348 aa18■□□□□ 0.47
SDC2-202ENST00000518385 INHBBP09529 407 aa18■□□□□ 0.47
SDC2-202ENST00000518385 CKMT2P17540 419 aa18■□□□□ 0.47
SDC2-202ENST00000518385 MC4RP32245 332 aa18■□□□□ 0.47
SDC2-202ENST00000518385 PTGER3P43115 390 aa18■□□□□ 0.47
SDC2-202ENST00000518385 ATXN3P54252 364 aaPredicted RBP18■□□□□ 0.47
SDC2-202ENST00000518385 CACNG1Q06432 222 aa18■□□□□ 0.47
SDC2-202ENST00000518385 KIF19Q2TAC6 998 aa18■□□□□ 0.47
SDC2-202ENST00000518385 PITRM1Q5JRX3 1037 aa18■□□□□ 0.47
SDC2-202ENST00000518385 RBM48Q5RL73 367 aaKnown RBP18■□□□□ 0.47
SDC2-202ENST00000518385 ATXN7L2Q5T6C5 722 aaPredicted RBP18■□□□□ 0.47
SDC2-202ENST00000518385 ZNF773Q6PK81 442 aa18■□□□□ 0.47
SDC2-202ENST00000518385 NEK10Q6ZWH5 1172 aa18■□□□□ 0.47
SDC2-202ENST00000518385 ISCA2Q86U28 154 aa18■□□□□ 0.47
SDC2-202ENST00000518385 FUNDC1Q8IVP5 155 aa18■□□□□ 0.47
SDC2-202ENST00000518385 PLPP6Q8IY26 295 aa18■□□□□ 0.47
SDC2-202ENST00000518385 CHCHD4Q8N4Q1 142 aa18■□□□□ 0.47
SDC2-202ENST00000518385 NKAPQ8N5F7 415 aaKnown RBP18■□□□□ 0.47
SDC2-202ENST00000518385 CELF5Q8N6W0 485 aaKnown RBP18■□□□□ 0.47
SDC2-202ENST00000518385 OR2AP1Q8NGE2 309 aa18■□□□□ 0.47
SDC2-202ENST00000518385 GIPC3Q8TF64 312 aa18■□□□□ 0.47
SDC2-202ENST00000518385 CHPT1Q8WUD6 406 aa18■□□□□ 0.47
SDC2-202ENST00000518385 HSPBAP1Q96EW2 488 aa18■□□□□ 0.47
SDC2-202ENST00000518385 BDH2Q9BUT1 245 aa18■□□□□ 0.47
SDC2-202ENST00000518385 APOL5Q9BWW9 433 aa18■□□□□ 0.47
SDC2-202ENST00000518385 GPR63Q9BZJ6 419 aa18■□□□□ 0.47
SDC2-202ENST00000518385 ANAPC2Q9UJX6 822 aa18■□□□□ 0.47
SDC2-202ENST00000518385 hCG_2014768A0A024R1R8 64 aa18■□□□□ 0.47
SDC2-202ENST00000518385 TMEM265A0A087WTH1 108 aa18■□□□□ 0.47
SDC2-202ENST00000518385 C16orf96A6NNT2 1141 aa18■□□□□ 0.47
SDC2-202ENST00000518385 H3BMQ9 156 aa18■□□□□ 0.47
SDC2-202ENST00000518385 IFRD1O00458 451 aaPredicted RBP18■□□□□ 0.47
SDC2-202ENST00000518385 SLC9A3R1O14745 358 aaPredicted RBP18■□□□□ 0.47
SDC2-202ENST00000518385 LDLRP01130 860 aa18■□□□□ 0.47
SDC2-202ENST00000518385 CD1DP15813 335 aa18■□□□□ 0.47
SDC2-202ENST00000518385 ZNF37AP17032 561 aaPredicted RBP18■□□□□ 0.47
SDC2-202ENST00000518385 HTR1EP28566 365 aa18■□□□□ 0.47
SDC2-202ENST00000518385 SERPINA4P29622 427 aa18■□□□□ 0.47
SDC2-202ENST00000518385 CD70P32970 193 aa18■□□□□ 0.47
SDC2-202ENST00000518385 RPS9P46781 194 aaKnown RBP18■□□□□ 0.47
SDC2-202ENST00000518385 CBX3Q13185 183 aa18■□□□□ 0.47
SDC2-202ENST00000518385 UGT3A2Q3SY77 523 aa18■□□□□ 0.47
SDC2-202ENST00000518385 LYPLAL1Q5VWZ2 237 aa18■□□□□ 0.47
SDC2-202ENST00000518385 KANK2Q63ZY3 851 aa18■□□□□ 0.47
SDC2-202ENST00000518385 DUS1LQ6P1R4 473 aaKnown RBP18■□□□□ 0.47
SDC2-202ENST00000518385 FRA10AC1Q70Z53 315 aa18■□□□□ 0.47
SDC2-202ENST00000518385 NPAS3Q8IXF0 933 aa18■□□□□ 0.47
SDC2-202ENST00000518385 CBARPQ8N350 705 aaPredicted RBP18■□□□□ 0.47
SDC2-202ENST00000518385 SFRP1Q8N474 314 aa18■□□□□ 0.47
SDC2-202ENST00000518385 RAB2BQ8WUD1 216 aa18■□□□□ 0.47
SDC2-202ENST00000518385 ANKRD49Q8WVL7 239 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms