RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 DNAH14Q0VDD8 3507 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 CDC7O00311 574 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 INSIG1O15503 277 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 CABYRO75952 493 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 CLPXO76031 633 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 KLKB1P03952 638 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 TYMPP19971 482 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 GDF5P43026 501 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 MCCD1P59942 119 aaPredicted RBP12.16□□□□□ -0.46
USP11-206ENST00000469080 NRG1Q02297 640 aaPredicted RBP12.16□□□□□ -0.46
USP11-206ENST00000469080 PMS2P3Q13401 168 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 BOP1Q14137 746 aaKnown RBP12.16□□□□□ -0.46
USP11-206ENST00000469080 C18orf21Q32NC0 220 aaPredicted RBP12.16□□□□□ -0.46
USP11-206ENST00000469080 NADSYN1Q6IA69 706 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 AFAP1L2Q8N4X5 818 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 OR4L1Q8NH43 312 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 PKP2Q99959 881 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 MKRN2Q9H000 416 aaKnown RBP12.16□□□□□ -0.46
USP11-206ENST00000469080 CSNK1G1Q9HCP0 422 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 HMG20AQ9NP66 347 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 PNPLA8Q9NP80 782 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 CRLS1Q9UJA2 301 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 CDH7Q9ULB5 785 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 SCML2Q9UQR0 700 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 PIK3R1P27986 724 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 CENPAP49450 140 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 PRKAA2P54646 552 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 GALK2Q01415 458 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 SEMA3BQ13214 749 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 HSF5Q4G112 596 aaPredicted RBP12.16□□□□□ -0.46
USP11-206ENST00000469080 CENPLQ8N0S6 344 aaPredicted RBP12.16□□□□□ -0.46
USP11-206ENST00000469080 CLHC1Q8NHS4 586 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 EMILIN2Q9BXX0 1053 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 SERHL2Q9H4I8 314 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 SLC35C2Q9NQQ7 365 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 HCFC1R1Q9NWW0 138 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 TRMT6Q9UJA5 497 aaKnown RBP12.16□□□□□ -0.46
USP11-206ENST00000469080 PKP3Q9Y446 797 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 A0A0B4J203 849 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 H7C4K7 107 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 JRKO75564 520 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 LTA4HP09960 611 aaKnown RBP12.16□□□□□ -0.46
USP11-206ENST00000469080 DHRS4L1P0CG22 281 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 SCNN1AP37088 669 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 KCNC1P48547 511 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 PPM1FP49593 454 aaPredicted RBP12.16□□□□□ -0.46
USP11-206ENST00000469080 VAC14Q08AM6 782 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 SPCS2Q15005 226 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 TRIP4Q15650 581 aaPredicted RBP12.16□□□□□ -0.46
USP11-206ENST00000469080 FIP1L1Q6UN15 594 aaKnown RBP12.16□□□□□ -0.46
USP11-206ENST00000469080 CCBE1Q6UXH8 406 aaPredicted RBP12.16□□□□□ -0.46
USP11-206ENST00000469080 IDO2Q6ZQW0 420 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 MAVSQ7Z434 540 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 KBTBD6Q86V97 674 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 SLC22A8Q8TCC7 542 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 MRPS31Q92665 395 aaKnown RBP12.16□□□□□ -0.46
USP11-206ENST00000469080 VPS33AQ96AX1 596 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 MARCH5Q9NX47 278 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 PKD2L2Q9NZM6 624 aa12.16□□□□□ -0.46
USP11-206ENST00000469080 VCANP13611 3396 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.15□□□□□ -0.46
USP11-206ENST00000469080 UBDO15205 165 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 SERPINA6P08185 405 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 CPOXP36551 454 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 CBX5P45973 191 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 EPHB3P54753 998 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 NTHL1P78549 312 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 GPR17Q13304 367 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 ARHGEF7Q14155 803 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 CUZD1Q86UP6 607 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 FIBCD1Q8N539 461 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 DNAJB14Q8TBM8 379 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 PXYLP1Q8TE99 480 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 SORT1Q99523 831 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 ASB8Q9H765 288 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 RMND5AQ9H871 391 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 WARS2Q9UGM6 360 aaKnown RBP12.15□□□□□ -0.46
USP11-206ENST00000469080 AP3M1Q9Y2T2 418 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 UPK3BL1B0FP48 263 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 UPK3BL2E5RIL1 263 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 PSMD3O43242 534 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 DEAF1O75398 565 aaPredicted RBP12.15□□□□□ -0.46
USP11-206ENST00000469080 CXCL14O95715 111 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 C1QAP02745 245 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 CCL5P13501 91 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 ICAM2P13598 275 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 ITGAXP20702 1163 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 EFNA1P20827 205 aaPredicted RBP12.15□□□□□ -0.46
USP11-206ENST00000469080 ARNTP27540 789 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 CSKP41240 450 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 SMARCB1Q12824 385 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 TRIM25Q14258 630 aaKnown RBP12.15□□□□□ -0.46
USP11-206ENST00000469080 RAB39AQ14964 217 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 PIWIL3Q7Z3Z3 882 aaKnown RBP12.15□□□□□ -0.46
USP11-206ENST00000469080 HERC6Q8IVU3 1022 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 FBXW8Q8N3Y1 598 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 ZNF558Q96NG5 402 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 CASD1Q96PB1 797 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 IL12RB2Q99665 862 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 TM9SF2Q99805 663 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms