RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 KCTD11Q693B1 232 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 HHIPL2Q6UWX4 724 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 CDH24Q86UP0 819 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 SYTL5Q8TDW5 730 aaPredicted RBP12.6□□□□□ -0.39
HERC3-203ENST00000407637 CLEC4DQ8WXI8 215 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 TRMT61AQ96FX7 289 aaKnown RBP12.6□□□□□ -0.39
HERC3-203ENST00000407637 MSANTD3Q96H12 275 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 DPEP3Q9H4B8 488 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 ACTR8Q9H981 624 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 MID1IP1Q9NPA3 183 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 RASSF1Q9NS23 344 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 B3GNT2Q9NY97 397 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.6□□□□□ -0.39
HERC3-203ENST00000407637 ATPIF1Q9UII2 106 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 SIX4Q9UIU6 781 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 TRMT6Q9UJA5 497 aaKnown RBP12.6□□□□□ -0.39
HERC3-203ENST00000407637 CDH9Q9ULB4 789 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 SNX7Q9UNH6 387 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 HSPB11Q9Y547 144 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 GPR45Q9Y5Y3 372 aa12.6□□□□□ -0.39
HERC3-203ENST00000407637 A0A087WZ62 844 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 SMLR1H3BR10 107 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 KCNQ2O43526 872 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 CPB1P15086 417 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 CSTF2P33240 577 aaKnown RBP eCLIP12.59□□□□□ -0.39
HERC3-203ENST00000407637 TALDO1P37837 337 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 TIGD6Q17RP2 521 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 SYVN1Q86TM6 617 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 FAM131BQ86XD5 332 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 C8orf37Q96NL8 207 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 CHCHD6Q9BRQ6 235 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 PORCNQ9H237 461 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 ALG9Q9H6U8 611 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 TMLHEQ9NVH6 421 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 LIMD1Q9UGP4 676 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 PKP3Q9Y446 797 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 LRRC14BA6NHZ5 514 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 TSC22D2O75157 780 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 SERPINF2P08697 491 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 ZNF37AP17032 561 aaPredicted RBP12.59□□□□□ -0.39
HERC3-203ENST00000407637 ZNF30P17039 623 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 GGT1P19440 569 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 DDCP20711 480 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 MYL9P24844 172 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 NPY2RP49146 381 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 PRIM2P49643 509 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 SCNN1GP51170 649 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 DAB2P98082 770 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 PLIN5Q00G26 463 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 DBPQ10586 325 aaPredicted RBP12.59□□□□□ -0.39
HERC3-203ENST00000407637 PON2Q15165 354 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 BAK1Q16611 211 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 AGAP9Q5VTM2 703 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 CREB3L2Q70SY1 520 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 TCTE3Q8IZS6 198 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 CPXCR1Q8N123 301 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 OR5K1Q8NHB7 308 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 ISG20Q96AZ6 181 aaKnown RBP12.59□□□□□ -0.39
HERC3-203ENST00000407637 FERD3LQ96RJ6 166 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 TRMOQ9BU70 441 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 ERVMER34-1Q9H9K5 563 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 CCNB1IP1Q9NPC3 277 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 SETD4Q9NVD3 440 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 SMPD4Q9NXE4 827 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 GTF2IRD1Q9UHL9 959 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 MUTYHQ9UIF7 546 aa12.59□□□□□ -0.39
HERC3-203ENST00000407637 A0A1W2PQ09 198 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 CIB4A0PJX0 185 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 CCDC182A6NF36 153 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 AZIN1O14977 448 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 BET1O15155 118 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 CDK14O94921 469 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 RPLP0P05388 317 aaKnown RBP12.58□□□□□ -0.39
HERC3-203ENST00000407637 NFKB1P19838 968 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 PIK3CBP42338 1070 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 RHAGQ02094 409 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 SMARCB1Q12824 385 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 TNK1Q13470 666 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 MFSD13AQ14CX5 517 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 DOK7Q18PE1 504 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 DCAF8Q5TAQ9 597 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 NDUFAF5Q5TEU4 345 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 PIK3R6Q5UE93 754 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 PM20D1Q6GTS8 502 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 CAPN13Q6MZZ7 669 aaPredicted RBP12.58□□□□□ -0.39
HERC3-203ENST00000407637 FAM171BQ6P995 826 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 NECAB2Q7Z6G3 386 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 DPP9Q86TI2 863 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 SLC22A9Q8IVM8 553 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 PNPLA1Q8N8W4 532 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 TRPM4Q8TD43 1214 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 UBE2FQ969M7 185 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 GMPPBQ9Y5P6 360 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 COL1A2P08123 1366 aa12.58□□□□□ -0.39
HERC3-203ENST00000407637 TYW5A2RUC4 315 aaKnown RBP12.58□□□□□ -0.4
HERC3-203ENST00000407637 SIX3O95343 332 aaPredicted RBP12.58□□□□□ -0.4
HERC3-203ENST00000407637 LTA4HP09960 611 aaKnown RBP12.58□□□□□ -0.4
HERC3-203ENST00000407637 KCNC1P48547 511 aa12.58□□□□□ -0.4
HERC3-203ENST00000407637 SRP54P61011 504 aaKnown RBP12.58□□□□□ -0.4
HERC3-203ENST00000407637 CXCR4P61073 352 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms