RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 RALAP11233 206 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 G6PDP11413 515 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 SLC2A4P14672 509 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 TKTP29401 623 aaKnown RBP4.88□□□□□ -1.63
GABPB1-204ENST00000396464 OTX2P32243 289 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 ABCG1P45844 678 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 AP3M2P53677 418 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 HUNKP57058 714 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 EEFSECP57772 596 aaKnown RBP4.88□□□□□ -1.63
GABPB1-204ENST00000396464 HNRNPKP61978 463 aaKnown RBP eCLIP4.88□□□□□ -1.63
GABPB1-204ENST00000396464 BMT2Q1RMZ1 405 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 USP41Q3LFD5 358 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 SLC36A3Q495N2 470 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 SPDYCQ5MJ68 293 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 PRAMEF20Q5VT98 475 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 ARHGEF16Q5VV41 709 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 DOK3Q7L591 496 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 NEK8Q86SG6 692 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 RTN4RL2Q86UN3 420 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 MYOCDQ8IZQ8 938 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 CMTM4Q8IZR5 234 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 GBP7Q8N8V2 638 aaPredicted RBP4.88□□□□□ -1.63
GABPB1-204ENST00000396464 LEMD2Q8NC56 503 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 OR52L2PQ8NGH6 319 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 OR8J1Q8NGP2 316 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 LILRB4Q8NHJ6 448 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 GDPD5Q8WTR4 605 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 SLC20A1Q8WUM9 679 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 FIG4Q92562 907 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 RIT1Q92963 219 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 C19orf60Q96EN9 201 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 NAF1Q96HR8 494 aaKnown RBP4.88□□□□□ -1.63
GABPB1-204ENST00000396464 SLC41A2Q96JW4 573 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 TUBA1CQ9BQE3 449 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 PIGQQ9BRB3 760 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 GLT8D2Q9H1C3 349 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 KCNK15Q9H427 330 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 HAUS4Q9H6D7 363 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 EVA1AQ9H8M9 152 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 AGO3Q9H9G7 860 aaKnown RBP4.88□□□□□ -1.63
GABPB1-204ENST00000396464 TRIM36Q9NQ86 728 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 AGPAT5Q9NUQ2 364 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 TBC1D13Q9NVG8 400 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 MTMR10Q9NXD2 777 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 CTTNBP2NLQ9P2B4 639 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 LARSQ9P2J5 1176 aaKnown RBP4.88□□□□□ -1.63
GABPB1-204ENST00000396464 DNAJB4Q9UDY4 337 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 AGO2Q9UKV8 859 aaKnown RBP4.88□□□□□ -1.63
GABPB1-204ENST00000396464 MRPS7Q9Y2R9 242 aaKnown RBP4.88□□□□□ -1.63
GABPB1-204ENST00000396464 PKP3Q9Y446 797 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 MFHAS1Q9Y4C4 1052 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 DMRT1Q9Y5R6 373 aa4.88□□□□□ -1.63
GABPB1-204ENST00000396464 DDX49Q9Y6V7 483 aaKnown RBP4.88□□□□□ -1.63
GABPB1-204ENST00000396464 KIAA1217Q5T5P2 1943 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 DCAF1Q9Y4B6 1507 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 OR6C68A6NDL8 312 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 ANKDD1BA6NHY2 528 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 XPO1O14980 1071 aaKnown RBP4.87□□□□□ -1.63
GABPB1-204ENST00000396464 SMAD9O15198 467 aaKnown RBP4.87□□□□□ -1.63
GABPB1-204ENST00000396464 STRNO43815 780 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 RPS6KA4O75676 772 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 TJP3O95049 919 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 SERPINC1P01008 464 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 SERPINA3P01011 423 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 CLUP10909 449 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 VPREB1P12018 145 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 UGT1A6P19224 532 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 DRD5P21918 477 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 ADRA1DP25100 572 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 MCM5P33992 734 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 RFC2P35250 354 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 PEX5P50542 639 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 HNRNPFP52597 415 aaKnown RBP4.87□□□□□ -1.63
GABPB1-204ENST00000396464 TAS2R40P59535 323 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 SLC20A2Q08357 652 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 RESTQ13127 1097 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 HNRNPDQ14103 355 aaKnown RBP4.87□□□□□ -1.63
GABPB1-204ENST00000396464 RPE65Q16518 533 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 FAM214AQ32MH5 1076 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 LRIT3Q3SXY7 679 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 GAGE13Q4V321 117 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 KCTD11Q693B1 232 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 KIF6Q6ZMV9 814 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 DET1Q7L5Y6 550 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 ZNF627Q7L945 461 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 LRRC70Q7Z2Q7 622 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 TSPAN33Q86UF1 283 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 ZDHHC21Q8IVQ6 265 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 AQP12AQ8IXF9 295 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 C4orf19Q8IY42 314 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 BHLHE23Q8NDY6 225 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 TRIM58Q8NG06 486 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 OR10T2Q8NGX3 314 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 B4GALNT2Q8NHY0 566 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 GPT2Q8TD30 523 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 C17orf50Q8WW18 174 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 ATG4AQ8WYN0 398 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 RAD54LQ92698 747 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 SLC25A28Q96A46 364 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 IFT74Q96LB3 600 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms