RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 SH3GL2Q99962 352 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 FOXP1Q9H334 677 aaPredicted RBP5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 MMP25Q9NPA2 562 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 TAB2Q9NYJ8 693 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 TTC7AQ9ULT0 858 aaPredicted RBP5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 PLAGL1Q9UM63 463 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 TNNQ9UQP3 1299 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 PAM16Q9Y3D7 125 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 CDH23Q9H251 3354 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 ECM29Q5VYK3 1845 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 A0A1B0GVM2 712 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 hCG_1809904A0A1W2PP81 198 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 A0A1W2PPE2 198 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 RPS10-NUDT3A0A1W2PQS6 291 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 A0A1W2PR64 198 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 VWA5AO00534 786 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 ZIC3O60481 467 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 AVILO75366 819 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 HOXC6P09630 235 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 MSH2P43246 934 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 ABCG1P45844 678 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 DYNLL1P63167 89 aaKnown RBP5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 GRSF1Q12849 480 aaKnown RBP eCLIP5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 BAATQ14032 418 aaPredicted RBP5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 DLG2Q15700 870 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 ETFDHQ16134 617 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 C15orf59Q2T9L4 293 aaPredicted RBP5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 ALDH1L2Q3SY69 923 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 IGSF11Q5DX21 431 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 DNTTIP2Q5QJE6 756 aaKnown RBP5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 ARMC3Q5W041 872 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 KRT79Q5XKE5 535 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 ADALQ6DHV7 355 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 TAOK1Q7L7X3 1001 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 ARID3BQ8IVW6 561 aaPredicted RBP5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 DSELQ8IZU8 1212 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 TMTC2Q8N394 836 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 MINDY1Q8N5J2 469 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 NRACQ8N912 160 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 POMGNT2Q8NAT1 580 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 ACER1Q8TDN7 264 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 TMCO6Q96DC7 493 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 CEP295NLQ96MC4 621 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 NUDCD1Q96RS6 583 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 MRPL1Q9BYD6 325 aaKnown RBP5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 EPB41L5Q9HCM4 733 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 CCDC177Q9NQR7 707 aaPredicted RBP5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 CNGB3Q9NQW8 809 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 PSD3Q9NYI0 1048 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 IL36RNQ9UBH0 155 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 OR14J1Q9UGF5 321 aa5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 PPIEQ9UNP9 301 aaKnown RBP5.57□□□□□ -1.52
RNU4-39P-201ENST00000362455 FLT1P17948 1338 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 CHD9Q3L8U1 2897 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 LOC100509620A0A075B734 347 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 LOC102723996A0A087X1L8 192 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 LNP1A1A4G5 178 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 WDR91A4D1P6 747 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 TSPY2A6NKD2 308 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 C19orf81C9J6K1 198 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 M0QZ24 198 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 RGS14O43566 566 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 EGFP01133 1207 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 APOA4P06727 396 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 ASNSP08243 561 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 TSPY3P0CV98 308 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 TSPY8P0CW00 308 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 HOXB2P14652 356 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 RPL3P39023 403 aaKnown RBP5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 PPP5CP53041 499 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 IRX3P78415 501 aaPredicted RBP5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 TSPY1Q01534 308 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 GRIK2Q13002 908 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 MVPQ14764 893 aaKnown RBP5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 KYNUQ16719 465 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 PPP6R3Q5H9R7 873 aaPredicted RBP5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 FSCBQ5H9T9 825 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 SPECC1Q5M775 1068 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 FNBP1LQ5T0N5 605 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 ERMARDQ5T6L9 678 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 TATDN1Q6P1N9 297 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 COLCA1Q6ZS62 124 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 KRT77Q7Z794 578 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 ZC3HC1Q86WB0 502 aaKnown RBP5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 EPHX4Q8IUS5 362 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 FOXP4Q8IVH2 680 aaPredicted RBP5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 MCEMP1Q8IX19 187 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 POGLUT1Q8NBL1 392 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 LRFN5Q96NI6 719 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 TMEM79Q9BSE2 394 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 KRTAP4-11Q9BYQ6 195 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 OR10A4Q9H209 315 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 SEBOXQ9HB31 216 aaPredicted RBP5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 PIH1D3Q9NQM4 214 aaKnown RBP5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 POT1Q9NUX5 634 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 AATFQ9NY61 560 aaKnown RBP eCLIP5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 RAI14Q9P0K7 980 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 TRPV2Q9Y5S1 764 aa5.56□□□□□ -1.52
RNU4-39P-201ENST00000362455 IGHV4-28A0A0C4DH34 117 aa5.55□□□□□ -1.52
RNU4-39P-201ENST00000362455 KANSL1LA0AUZ9 987 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms