RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SULT1C3Q6IMI6 304 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 USP43Q70EL4 1123 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 C17orf64Q86WR6 236 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 SLC13A3Q8WWT9 602 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 FCGR1BQ92637 280 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 NCKAP1Q9Y2A7 1128 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 OR6C70A6NIJ9 312 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 CPNE3O75131 537 aaKnown RBP16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 FMO3P31513 532 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 CDH5P33151 784 aaPredicted RBP16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 STT3AP46977 705 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 MOGSQ13724 837 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 METTL3Q86U44 580 aaKnown RBP16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 TRUB1Q8WWH5 349 aaKnown RBP16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 PSMG2Q969U7 264 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 ZNF558Q96NG5 402 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 GSDMCQ9BYG8 508 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 ZNF696Q9H7X3 374 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 EIF2B3Q9NR50 452 aaKnown RBP16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 OXSMQ9NWU1 459 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 HMGXB4Q9UGU5 601 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 FAM172BPA6NC97 362 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 RAP2AP10114 183 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 ZNF182P17025 639 aaPredicted RBP16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 TACR2P21452 398 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 ASMTP46597 345 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 OR52E8Q6IFG1 317 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 PGBD2Q6P3X8 592 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 CERS6Q6ZMG9 384 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 HNRNPABQ99729 332 aaKnown RBP16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 TMLHEQ9NVH6 421 aa16.24■□□□□ 0.19
SH3RF1-201ENST00000284637 MYBPHLA2RUH7 354 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 YJEFN3A6XGL0 299 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 TMEM233B4DJY2 109 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 SLC30A4O14863 429 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 C8BP07358 591 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 GPD2P43304 727 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 DCST1Q5T197 706 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 FAM171BQ6P995 826 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 NAT16Q8N8M0 369 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 GATA6Q92908 595 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 ZNF347Q96SE7 839 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 C11orf16Q9NQ32 467 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 SLC35C2Q9NQQ7 365 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 FKBPLQ9UIM3 349 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 ZSCAN5BA6NJL1 495 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 MAGEB3O15480 346 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 RPLP0P05388 317 aaKnown RBP16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 CLCNKBP51801 687 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 YBEYP58557 167 aaPredicted RBP16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 PPP2R2BQ00005 443 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 CHIT1Q13231 466 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 SLC10A6Q3KNW5 377 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 MSS51Q4VC12 460 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 RPTNQ6XPR3 784 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 PHTF2Q8N3S3 785 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 NEK6Q9HC98 313 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 EXD2Q9NVH0 621 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 PCDHGA4Q9Y5G9 962 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 DISP2A7MBM2 1401 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 ADAMDEC1O15204 470 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 CORO1AP31146 461 aaKnown RBP16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 CCL23P55773 120 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 LILRA4P59901 499 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 IKBKEQ14164 716 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 ZNF697Q5TEC3 545 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 PARGQ86W56 976 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 CSGALNACT1Q8TDX6 532 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 EFHD2Q96C19 240 aaPredicted RBP16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 PIWIL1Q96J94 861 aaKnown RBP16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 SLC22A4Q9H015 551 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 C3orf14Q9HBI5 128 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 IMP3Q9NV31 184 aaKnown RBP16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 GULP1Q9UBP9 304 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 SMIM35A0A1B0GVV1 85 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 OR2AG2A6NM03 316 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 H3BM21 787 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 CDK14O94921 469 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 CTSEP14091 401 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 PLEKHG6Q3KR16 790 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 PLA2G4EQ3MJ16 856 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 AGMOQ6ZNB7 445 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 LAPTM4BQ86VI4 370 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 ADAMTS15Q8TE58 950 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 EXOSC8Q96B26 276 aaKnown RBP16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 ZNF717Q9BY31 904 aaPredicted RBP16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 TNKS2Q9H2K2 1166 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 DHRS7Q9Y394 339 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 ST14Q9Y5Y6 855 aa16.23■□□□□ 0.19
SH3RF1-201ENST00000284637 IRGMA1A4Y4 181 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 FAM86C2PA6NEL3 165 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 TOP3BO95985 862 aaKnown RBP16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 SAGP10523 405 aaPredicted RBP16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 MYCLP1P12525 358 aaPredicted RBP16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 HNMTP50135 292 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 PPP1R8Q12972 351 aaKnown RBP16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 EMC3Q9P0I2 261 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 DNAJB9Q9UBS3 223 aa16.22■□□□□ 0.19
SH3RF1-201ENST00000284637 OR6C75A6NL08 312 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms