RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 DCTP40126 519 aa17.42■□□□□ 0.38
CDKN1B-201ENST00000228872 RABGGTBP53611 331 aa17.42■□□□□ 0.38
CDKN1B-201ENST00000228872 FADDQ13158 208 aa17.42■□□□□ 0.38
CDKN1B-201ENST00000228872 ZNF404Q494X3 552 aa17.42■□□□□ 0.38
CDKN1B-201ENST00000228872 XKR7Q5GH72 579 aa17.42■□□□□ 0.38
CDKN1B-201ENST00000228872 LAIR1Q6GTX8 287 aa17.42■□□□□ 0.38
CDKN1B-201ENST00000228872 SCIMPQ6UWF3 145 aa17.42■□□□□ 0.38
CDKN1B-201ENST00000228872 CCBE1Q6UXH8 406 aaPredicted RBP17.42■□□□□ 0.38
CDKN1B-201ENST00000228872 GALNT7Q86SF2 657 aa17.42■□□□□ 0.38
CDKN1B-201ENST00000228872 ATPAF2Q8N5M1 289 aa17.42■□□□□ 0.38
CDKN1B-201ENST00000228872 B3GALNT2Q8NCR0 500 aa17.42■□□□□ 0.38
CDKN1B-201ENST00000228872 OR5K1Q8NHB7 308 aa17.42■□□□□ 0.38
CDKN1B-201ENST00000228872 DNAJB3Q8WWF6 145 aa17.42■□□□□ 0.38
CDKN1B-201ENST00000228872 TMEM209Q96SK2 561 aa17.42■□□□□ 0.38
CDKN1B-201ENST00000228872 COLEC11Q9BWP8 271 aa17.42■□□□□ 0.38
CDKN1B-201ENST00000228872 DCSTAMPQ9H295 470 aa17.42■□□□□ 0.38
CDKN1B-201ENST00000228872 ACTR8Q9H981 624 aa17.42■□□□□ 0.38
CDKN1B-201ENST00000228872 EFCAB9A8MZ26 197 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 FTH1P02794 183 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 HLA-DQB2P05538 268 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 DARSP14868 501 aaKnown RBP17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 TGFBR2P37173 567 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 FBXO47Q5MNV8 452 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 METTL4Q8N3J2 472 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 PROKR1Q8TCW9 393 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 CCDC115Q96NT0 180 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 TKTL2Q9H0I9 626 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 RGS18Q9NS28 235 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 AASSQ9UDR5 926 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 LIMD1Q9UGP4 676 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 ZNF221Q9UK13 617 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 PCDHB14Q9Y5E9 798 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 BPTFQ12830 3046 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 GRXCR2A6NFK2 248 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 GNRH1P01148 92 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 PCSK7Q16549 785 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 AGAP6Q5VW22 663 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 CES5AQ6NT32 575 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 NOTUMQ6P988 496 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 GDPD3Q7L5L3 318 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 ARHGAP12Q8IWW6 846 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 EID3Q8N140 333 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 CELF2-AS1Q8N7Q2 184 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 ASCC1Q8N9N2 400 aaKnown RBP17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 IL17RDQ8NFM7 739 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 OR2T11Q8NH01 316 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 ZNF583Q96ND8 569 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 AGAP4Q96P64 663 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 ATOH8Q96SQ7 321 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 GORASP2Q9H8Y8 452 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 ACOT13Q9NPJ3 140 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 MARCH4Q9P2E8 410 aaPredicted RBP17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 CARD8Q9Y2G2 431 aa17.41■□□□□ 0.38
CDKN1B-201ENST00000228872 CCL22O00626 93 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 ITGAMP11215 1152 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 PRKAR2AP13861 404 aaKnown RBP17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 CD36P16671 472 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 PRKCAP17252 672 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 FDXRP22570 491 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 CCND3P30281 292 aaPredicted RBP17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 ZNF135P52742 658 aaPredicted RBP17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 ERVK-8P63133 956 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 CHRNEQ04844 493 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 TRAF3Q13114 568 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 CLEC20AQ6ZU45 233 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 PAQR9Q6ZVX9 377 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 SPATC1Q76KD6 591 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 OSTM1Q86WC4 334 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 AADATQ8N5Z0 425 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 TNIP3Q96KP6 325 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 SNX18Q96RF0 628 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 RHNO1Q9BSD3 238 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 NXF3Q9H4D5 531 aaKnown RBP17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 WDCPQ9H6R7 721 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 ITM2CQ9NQX7 267 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 CRYL1Q9Y2S2 319 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 TBKBP1A7MCY6 615 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 GSTA4O15217 222 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 CST5P28325 142 aaPredicted RBP17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 CLCNKBP51801 687 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 DAOAP59103 153 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 PRKG2Q13237 762 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 FBXO48Q5FWF7 155 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 ZC3H12BQ5HYM0 836 aaKnown RBP17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 ATAD3CQ5T2N8 411 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 PNCKQ6P2M8 343 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 KLHDC9Q8NEP7 349 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 OR6F1Q8NGZ6 308 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 CD99L2Q8TCZ2 262 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 PGAP3Q96FM1 320 aaPredicted RBP17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 CCDC177Q9NQR7 707 aaPredicted RBP17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 ADGRE2Q9UHX3 823 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 NEUROG3Q9Y4Z2 214 aa17.4■□□□□ 0.38
CDKN1B-201ENST00000228872 CLDN24A6NM45 220 aa17.39■□□□□ 0.37
CDKN1B-201ENST00000228872 MAFKO60675 156 aa17.39■□□□□ 0.37
CDKN1B-201ENST00000228872 MITFO75030 526 aaPredicted RBP17.39■□□□□ 0.37
CDKN1B-201ENST00000228872 MFN2O95140 757 aa17.39■□□□□ 0.37
CDKN1B-201ENST00000228872 ELNP15502 786 aa17.39■□□□□ 0.37
CDKN1B-201ENST00000228872 PFKLP17858 780 aa17.39■□□□□ 0.37
CDKN1B-201ENST00000228872 PRDX3P30048 256 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 217.3 ms