RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 TRIM54Q9BYV2 358 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 PARVBQ9HBI1 364 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 WWOXQ9NZC7 414 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 ASB1Q9Y576 335 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 PABPN1LA6NDY0 278 aaKnown RBP17.78■□□□□ 0.44
VIM-201ENST00000224237 PLRG1O43660 514 aaKnown RBP17.78■□□□□ 0.44
VIM-201ENST00000224237 ESRRBO95718 433 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 CYP2A7P20853 494 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 RBBP7Q16576 425 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 NXNQ6DKJ4 435 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 PNCKQ6P2M8 343 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 UBTD2Q8WUN7 234 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 SLC7A6OSQ96CW6 309 aaPredicted RBP17.78■□□□□ 0.44
VIM-201ENST00000224237 ZNF382Q96SR6 550 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 OR2AG1Q9H205 316 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 CD248Q9HCU0 757 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 STK38LQ9Y2H1 464 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 TRPM6Q9BX84 2022 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 TMEM202A6NGA9 273 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 GFYI3L273 518 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 CRCPO75575 148 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 RASSF9O75901 435 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 PCCBP05166 539 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 ENO1P06733 434 aaKnown RBP17.78■□□□□ 0.44
VIM-201ENST00000224237 GSTM1P09488 218 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 HIST1H2AGP0C0S8 130 aaPredicted RBP17.78■□□□□ 0.44
VIM-201ENST00000224237 HIST1H2ADP20671 130 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 MAPK9P45984 424 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 GSTM4Q03013 218 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 UGT3A2Q3SY77 523 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 KIAA1161Q6NSJ0 714 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 TRAPPC5Q8IUR0 188 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 TCAIMQ8N3R3 496 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 ACTRT2Q8TDY3 377 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 C19orf60Q96EN9 201 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 COX14Q96I36 57 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 HIST1H2AHQ96KK5 128 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 LENG8Q96PV6 779 aaPredicted RBP17.78■□□□□ 0.44
VIM-201ENST00000224237 HIST1H2AJQ99878 128 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 H2AFJQ9BTM1 129 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 ARHGEF3Q9NR81 526 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 ATXN10Q9UBB4 475 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 TAGLN3Q9UI15 199 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 GPR34Q9UPC5 381 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 PDE10AQ9Y233 779 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 DNAJC15Q9Y5T4 150 aa17.78■□□□□ 0.44
VIM-201ENST00000224237 SLC5A10A0PJK1 596 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 TAPBPO15533 448 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 DCXO43602 365 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 LILRB5O75023 590 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 IL9P15248 144 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 PTPN4P29074 926 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 HSPA7P48741 367 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 PKNOX1P55347 436 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 RPS21P63220 83 aaKnown RBP17.77■□□□□ 0.43
VIM-201ENST00000224237 TFF2Q03403 129 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 GTF2H2Q13888 395 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 EOGTQ5NDL2 527 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 PTCRAQ6ISU1 281 aaPredicted RBP17.77■□□□□ 0.43
VIM-201ENST00000224237 GTF2H2CQ6P1K8 395 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 GPRIN3Q6ZVF9 776 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 PLA2G15Q8NCC3 412 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 TWIST2Q8WVJ9 160 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 LINC00615Q96LM1 132 aaPredicted RBP17.77■□□□□ 0.43
VIM-201ENST00000224237 TMEM79Q9BSE2 394 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 CD244Q9BZW8 370 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 MRGBPQ9NV56 204 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 ARL15Q9NXU5 204 aa17.77■□□□□ 0.43
VIM-201ENST00000224237 LIN7AO14910 233 aaPredicted RBP17.76■□□□□ 0.43
VIM-201ENST00000224237 C7P10643 843 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 TEAD1P28347 426 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 HNMTP50135 292 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 FOXA1P55317 472 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 AP1S2P56377 157 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 CCINQ13939 588 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 WSCD2Q2TBF2 565 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 C18orf21Q32NC0 220 aaPredicted RBP17.76■□□□□ 0.43
VIM-201ENST00000224237 FBXW10Q5XX13 1052 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 TTC23LQ6PF05 361 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 EFL1Q7Z2Z2 1120 aaKnown RBP17.76■□□□□ 0.43
VIM-201ENST00000224237 GOLGA7Q7Z5G4 137 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 SYVN1Q86TM6 617 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 KBTBD6Q86V97 674 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 HEATR4Q86WZ0 1026 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 KIF2BQ8N4N8 673 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 OR14C36Q8NHC7 312 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 RPLP0P6Q8NHW5 317 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 FAM3CQ92520 227 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 SIPA1Q96FS4 1042 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 NUSAP1Q9BXS6 441 aaKnown RBP17.76■□□□□ 0.43
VIM-201ENST00000224237 SLC2A4RGQ9NR83 387 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 OPTCQ9UBM4 332 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 FAM8A1Q9UBU6 413 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 FZD4Q9ULV1 537 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 ZFR2Q9UPR6 939 aaKnown RBP17.76■□□□□ 0.43
VIM-201ENST00000224237 NUMA1Q14980 2115 aa17.76■□□□□ 0.43
VIM-201ENST00000224237 A0A1B0GTL3 188 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 SLC22A2O15244 555 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 MATN4O95460 622 aa17.75■□□□□ 0.43
VIM-201ENST00000224237 UROSP10746 265 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 189.2 ms