RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 RYKP34925 604 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 PCYT1AP49585 367 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 TUBP50607 506 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 CLCN3P51790 818 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 NUDT6P53370 316 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 NLRP11P59045 1033 aaKnown RBP3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 YWHAZP63104 245 aaKnown RBP3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 ADORA2A-AS1P86434 159 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 POU5F1BQ06416 359 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 CRYZQ08257 329 aaKnown RBP3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 DSC1Q08554 894 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 GPM6BQ13491 265 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 CAMK1Q14012 370 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 TRIM29Q14134 588 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 BTG3Q14201 252 aaPredicted RBP3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 MYBPC2Q14324 1141 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 ZNF667Q5HYK9 610 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 PDXDC1Q6P996 788 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 OTUD6AQ7L8S5 288 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 LURAP1LQ8IV03 231 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 DENND6AQ8IWF6 608 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 DIS3L2Q8IYB7 885 aaKnown RBP3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 ESX1Q8N693 406 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 METTL13Q8N6R0 699 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 NECAB1Q8N987 351 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 NOC3LQ8WTT2 800 aaKnown RBP3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 ADAMTS14Q8WXS8 1223 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 PABPC5Q96DU9 382 aaKnown RBP3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 APOPT1Q96IL0 206 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 ZNF479Q96JC4 524 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 MTMR9Q96QG7 549 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 HSD17B14Q9BPX1 270 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 GCOM2Q9BZD3 368 aaPredicted RBP3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 ANKEF1Q9NU02 776 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 ANKRD10Q9NXR5 420 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 HCN3Q9P1Z3 774 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 PDP2Q9P2J9 529 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 SLC25A10Q9UBX3 287 aaPredicted RBP3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 TBX20Q9UMR3 447 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 DENND4AQ7Z401 1863 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 XIRP2A4UGR9 3374 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 C2orf16Q68DN1 1984 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 FSD2A1L4K1 749 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 TYW5A2RUC4 315 aaKnown RBP3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 DENND3A2RUS2 1198 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 CLEC18AA5D8T8 446 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 KDM4EB2RXH2 506 aaPredicted RBP3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 PROB1E7EW31 1015 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 NEMFO60524 1076 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 JAK2O60674 1132 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 GLUD1P00367 558 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 T-ENOLP0DO92 83 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 SLC2A4P14672 509 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 ZNF8P17098 575 aaPredicted RBP3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 PTPN2P17706 415 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 SRD5A1P18405 259 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 MYF6P23409 242 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 RPA1P27694 616 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 TKTP29401 623 aaKnown RBP3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 YWHABP31946 246 aaKnown RBP3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 GLUD2P49448 558 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 CXCR3P49682 368 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 CLCN5P51795 746 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 EFNB1P98172 346 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 DRP2Q13474 957 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 ERV3-1Q14264 604 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 PDIA5Q14554 519 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 MXD4Q14582 209 aaPredicted RBP3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 GPR68Q15743 365 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 CALCRLQ16602 461 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 BAK1Q16611 211 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 TMEM266Q2M3C6 531 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 TDRD12Q587J7 1177 aaKnown RBP3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 DCAF6Q58WW2 860 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 SERTAD4-AS1Q5TG53 156 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 TADA2BQ86TJ2 420 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 TBC1D26Q86UD7 250 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 ECHDC2Q86YB7 292 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 CCDC83Q8IWF9 413 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 CLEC18CQ8NCF0 446 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 ELP5Q8TE02 316 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 TCP11Q8WWU5 503 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 PSPC1Q8WXF1 523 aaKnown RBP3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 THOC3Q96J01 351 aaKnown RBP3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 C8orf76Q96K31 380 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 CEP170P1Q96L14 293 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 TBATAQ96M53 351 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 CASD1Q96PB1 797 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 EIF2AK1Q9BQI3 630 aaKnown RBP3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 LXNQ9BS40 222 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 NFKBIZQ9BYH8 718 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 TMEM117Q9H0C3 514 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 CWH43Q9H720 699 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 UBE2ZQ9H832 354 aaPredicted RBP3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 TUFT1Q9NNX1 390 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 WASH6PQ9NQA3 447 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 SNTG1Q9NSN8 517 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 SUCLA2Q9P2R7 463 aaPredicted RBP3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 WRAP73Q9P2S5 460 aaPredicted RBP3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 WNT16Q9UBV4 365 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms