RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 CPSF2Q9P2I0 782 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-211ENST00000595945 WDR91A4D1P6 747 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 KLHL33A6NCF5 533 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 MGAT4DA6NG13 374 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 PRR19A6NJB7 356 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 BTN3A1O00481 513 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 KLF11O14901 512 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 LIN7AO14910 233 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 GRID2O43424 1007 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 POP7O75817 140 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 MYL2P10916 166 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 MTHFD2P13995 350 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 BGNP21810 368 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 BCKDHBP21953 392 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 KCNA4P22459 653 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 CD27P26842 260 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 ARHGAP8P85298 464 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 HSPA14Q0VDF9 509 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 BOP1Q14137 746 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 PPP1R3AQ16821 1122 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 CES4AQ5XG92 561 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 SBSNQ6UWP8 590 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 TAX1BP1Q86VP1 789 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 WDR5BQ86VZ2 330 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 SLC22A15Q8IZD6 547 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 MAML2Q8IZL2 1156 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 LILRA3Q8N6C8 439 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 FAM174AQ8TBP5 190 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 STAG3L4Q8TBR4 150 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 SPACA7Q96KW9 195 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 WDR92Q96MX6 357 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 ZNF317Q96PQ6 595 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 COG4Q9H9E3 785 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 FGF22Q9HCT0 170 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 PSD3Q9NYI0 1048 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 INVSQ9Y283 1065 aa14.46□□□□□ -0.09
SHKBP1-211ENST00000595945 KMT2EQ8IZD2 1858 aa14.46□□□□□ -0.1
SHKBP1-211ENST00000595945 TNFRSF10CO14798 259 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 KMOO15229 486 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 KLK8O60259 260 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 KELP23276 732 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 ATP5F1P24539 256 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 HK3P52790 923 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 PRKAA2P54646 552 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 NFKB2Q00653 900 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 PLOD1Q02809 727 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 DMPKQ09013 629 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 PYCR3Q53H96 274 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 FAM83HQ6ZRV2 1179 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 TRIM42Q8IWZ5 723 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 TMEM105Q8N8V8 129 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 OR56A4Q8NGH8 313 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 TIMM29Q9BSF4 260 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 MANSC1Q9H8J5 431 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 RDH14Q9HBH5 336 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 SLC23A2Q9UGH3 650 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 SUFUQ9UMX1 484 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 SLCO1B1Q9Y6L6 691 aa14.45□□□□□ -0.1
SHKBP1-211ENST00000595945 PCM1Q15154 2024 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 A0A1W2PR77 199 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 NEMP2A6NFY4 417 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 A8MT66 165 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 GFYI3L273 518 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 UBXN8O00124 270 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 SLC16A5O15375 505 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 TRIM13O60858 407 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 KCNJ13O60928 360 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 MATN4O95460 622 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 PBLDP30039 288 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 RABIFP47224 123 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 PREPP48147 710 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 FNTBP49356 437 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 DNAJB13P59910 316 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 RPL6Q02878 288 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 RPA4Q13156 261 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 CHI3L2Q15782 390 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 SYTL3Q4VX76 610 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 TSSK4Q6SA08 328 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 Q6ZSR6 202 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 BMP8AQ7Z5Y6 402 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 ADAMTSL2Q86TH1 951 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 AMZ2Q86W34 360 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 OR13H1Q8NG92 308 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 C1orf216Q8TAB5 229 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 LRRC8CQ8TDW0 803 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 ASB11Q8WXH4 323 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 OR1E3Q8WZA6 343 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 DLG3Q92796 817 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 TMEM159Q96B96 161 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 CCDC126Q96EE4 140 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 GATA5Q9BWX5 397 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 DUSP15Q9H1R2 295 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 OR52A5Q9H2C5 316 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 TM7SF3Q9NS93 570 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 NUDT4Q9NZJ9 180 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 ADAMTS6Q9UKP5 1117 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 RNF112Q9ULX5 631 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 TMCO1Q9UM00 188 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 PRKAB1Q9Y478 270 aa14.44□□□□□ -0.1
SHKBP1-211ENST00000595945 OARD1Q9Y530 152 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms