RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 ACRV1P26436 265 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 ATP1A2P50993 1020 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 SNX1Q13596 522 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 SEPT6Q14141 434 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 CCDC38Q502W7 563 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 ZRANB3Q5FWF4 1079 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 SEL1L2Q5TEA6 688 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 CACHD1Q5VU97 1274 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 IRGCQ6NXR0 463 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 UNC5BQ8IZJ1 945 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 CLDN19Q8N6F1 224 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 IL22RA1Q8N6P7 574 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 DCUN1D1Q96GG9 259 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 ZDHHC12Q96GR4 267 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 C12orf66Q96MD2 445 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 ZPBPQ9BS86 351 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 LZTFL1Q9NQ48 299 aa14.31□□□□□ -0.12
FANCA-220ENST00000566409 LOC101059948A0A1B0GTJ6 334 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 KLHL33A6NCF5 533 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 OR51F1A6NGY5 319 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 GOLGA6L6A8MZA4 724 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 RASSF9O75901 435 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 SUN1O94901 812 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 IFNB1P01574 187 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 RALBP11234 206 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 NELFEP18615 380 aaKnown RBP14.3□□□□□ -0.12
FANCA-220ENST00000566409 CCZ1BP86790 482 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 CCZ1P86791 482 aaPredicted RBP14.3□□□□□ -0.12
FANCA-220ENST00000566409 FOXM1Q08050 763 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 RPS6KA1Q15418 735 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 DBN1Q16643 649 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 TBR1Q16650 682 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 CERS6Q6ZMG9 384 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 ZNF662Q6ZS27 426 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 LRRC8AQ8IWT6 810 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 NLGN4XQ8N0W4 816 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 NLGN4YQ8NFZ3 816 aaPredicted RBP14.3□□□□□ -0.12
FANCA-220ENST00000566409 OR13J1Q8NGT2 312 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 STYXQ8WUJ0 223 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 LRRC45Q96CN5 670 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 MED8Q96G25 268 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 SLC41A2Q96JW4 573 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 OR6C1Q96RD1 312 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 NRTNQ99748 197 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 FRMD8P1Q9BZ68 369 aaPredicted RBP14.3□□□□□ -0.12
FANCA-220ENST00000566409 SLC24A2Q9UI40 661 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 ZNF148Q9UQR1 794 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 PRSS21Q9Y6M0 314 aa14.3□□□□□ -0.12
FANCA-220ENST00000566409 C17orf113A0A1B0GUU1 675 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 CCDC162PA2VCL2 907 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 OR5K3A6NET4 321 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 CFAP99D6REC4 459 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 ITGB2P05107 769 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 ZSCAN5DPP0CG00 497 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 MAP4P27816 1152 aaKnown RBP14.29□□□□□ -0.12
FANCA-220ENST00000566409 PDHA2P29803 388 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 FOXN2P32314 431 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 CACNG1Q06432 222 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 KCTD19Q17RG1 926 aaPredicted RBP14.29□□□□□ -0.12
FANCA-220ENST00000566409 TAS2R42Q7RTR8 314 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 LINC00523Q86TU6 105 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 ZSCAN1Q8NBB4 408 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 HM13Q8TCT9 377 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 HEXDCQ8WVB3 486 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 UBE2Q2Q8WVN8 375 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 ZFPM2Q8WW38 1151 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 ELMO2Q96JJ3 720 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 PPM1MQ96MI6 270 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 ZNF778Q96MU6 729 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 MAP3K3Q99759 626 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 CCM2Q9BSQ5 444 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 TLR10Q9BXR5 811 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 OR52A5Q9H2C5 316 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 KIR3DX1Q9H7L2 352 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 COG4Q9H9E3 785 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 HRASLS2Q9NWW9 162 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 SLC2A6Q9UGQ3 507 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 IL17BQ9UHF5 180 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 SEC16AO15027 2179 aa14.29□□□□□ -0.12
FANCA-220ENST00000566409 SETXQ7Z333 2677 aaKnown RBP14.28□□□□□ -0.12
FANCA-220ENST00000566409 ERI2A8K979 691 aaKnown RBP14.28□□□□□ -0.12
FANCA-220ENST00000566409 SNRNP200O75643 2136 aaKnown RBP14.28□□□□□ -0.12
FANCA-220ENST00000566409 TIAF1O95411 115 aa14.28□□□□□ -0.12
FANCA-220ENST00000566409 SLC35G4P0C7Q5 338 aa14.28□□□□□ -0.12
FANCA-220ENST00000566409 FAM87AP0C7U9 286 aa14.28□□□□□ -0.12
FANCA-220ENST00000566409 FGF5P12034 268 aa14.28□□□□□ -0.12
FANCA-220ENST00000566409 FOLR1P15328 257 aa14.28□□□□□ -0.12
FANCA-220ENST00000566409 F8A1P23610 371 aa14.28□□□□□ -0.12
FANCA-220ENST00000566409 MSNP26038 577 aaKnown RBP14.28□□□□□ -0.12
FANCA-220ENST00000566409 RPL22P35268 128 aaKnown RBP14.28□□□□□ -0.12
FANCA-220ENST00000566409 FDFT1P37268 417 aa14.28□□□□□ -0.12
FANCA-220ENST00000566409 CDH17Q12864 832 aa14.28□□□□□ -0.12
FANCA-220ENST00000566409 SEMA5AQ13591 1074 aa14.28□□□□□ -0.12
FANCA-220ENST00000566409 IL11RAQ14626 422 aa14.28□□□□□ -0.12
FANCA-220ENST00000566409 KCNAB1Q14722 419 aa14.28□□□□□ -0.12
FANCA-220ENST00000566409 PLCL1Q15111 1095 aa14.28□□□□□ -0.12
FANCA-220ENST00000566409 CASS4Q9NQ75 786 aa14.28□□□□□ -0.12
FANCA-220ENST00000566409 RAB6BQ9NRW1 208 aa14.28□□□□□ -0.12
FANCA-220ENST00000566409 FLNBO75369 2602 aaKnown RBP14.27□□□□□ -0.13
FANCA-220ENST00000566409 MYO18BQ8IUG5 2567 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms