RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 CASS4Q9NQ75 786 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 DZANK1Q9NVP4 752 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 B3GNT2Q9NY97 397 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 PRPF19Q9UMS4 504 aaKnown RBP8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 PRG3Q9Y2Y8 225 aaPredicted RBP8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 GNG14A0A1W2PPG7 69 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 B4E171 279 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 ACOX3O15254 700 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 SUPT7LO94864 414 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 GNRH1P01148 92 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 FTH1P02794 183 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 PTPN7P35236 360 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 RGS1Q08116 209 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 RTL10Q7L3V2 364 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 IZUMO1Q8IYV9 350 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 KDM1BQ8NB78 822 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 ALG3Q92685 438 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 EDEM2Q9BV94 578 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 GRIP1Q9Y3R0 1128 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 KDM5AP29375 1690 aaKnown RBP8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 A0A0B4J269 797 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 CDC7O00311 574 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 MYL12BO14950 172 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 ANGPTL1O95841 491 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 LCP1P13796 627 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 MYL12AP19105 171 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 ECHS1P30084 290 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 GJA5P36382 358 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 FMO5P49326 533 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 POU3F4P49335 361 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 CRY2Q49AN0 593 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 TTC23Q5W5X9 447 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 PROM2Q8N271 834 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 TMEM68Q96MH6 324 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 OMDQ99983 421 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 CDCP1Q9H5V8 836 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 SMOXQ9NWM0 555 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 GPATCH2LQ9NWQ4 482 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.89□□□□□ -0.999e-7■■■■■ 42.6
GTF2A1-203ENST00000553612 UBP1Q9NZI7 540 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 KCNU1A8MYU2 1149 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 M0QYV0 167 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 MAGEB1P43366 347 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 SLC7A2P52569 658 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 RHDQ02161 417 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 TNFRSF17Q02223 184 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 MIIPQ5JXC2 388 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 ZNF572Q7Z3I7 529 aaPredicted RBP8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 NAA40Q86UY6 237 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 CENPLQ8N0S6 344 aaPredicted RBP8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 KAT2AQ92830 837 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 SCRN2Q96FV2 425 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 TMEM80Q96HE8 168 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 PELOQ9BRX2 385 aaKnown RBP8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 ZDHHC18Q9NUE0 388 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 CES2O00748 559 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 GREM1O60565 184 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 ATG13O75143 517 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 EPHX2P34913 555 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 PPM1AP35813 382 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 RAB13P51153 203 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 BLOC1S1P78537 153 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 ANKRD22Q5VYY1 191 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 MILR1Q7Z6M3 343 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 SLC44A5Q8NCS7 719 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 DCAF5Q96JK2 942 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 CMSS1Q9BQ75 279 aaKnown RBP8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 GREM2Q9H772 168 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 GMPPBQ9Y5P6 360 aa8.89□□□□□ -0.99
GTF2A1-203ENST00000553612 TPP1O14773 563 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 FHP07954 510 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 SPARCP09486 303 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 DNASE1P24855 282 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 STOMP27105 288 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 LCN1P31025 176 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 TIE1P35590 1138 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 HCAR3P49019 387 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 SAMD4BQ5PRF9 694 aaKnown RBP8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 HEATR6Q6AI08 1181 aaKnown RBP8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 XRRA1Q6P2D8 792 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 SYNE4Q8N205 404 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 ZC3H12CQ9C0D7 883 aaKnown RBP8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 SLC23A1Q9UHI7 598 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 MYH7BA7E2Y1 1941 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 MYH13Q9UKX3 1938 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 WDR17Q8IZU2 1322 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 SLC12A8A0AV02 714 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 SULT1C2O00338 296 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 WNT7AO00755 349 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 TGOLN2O43493 480 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 PRAMEF1O95521 474 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 RAB4AP20338 218 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 LIPNQ5VXI9 398 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 KIAA1841Q6NSI8 718 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 MEIOBQ8N635 442 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 KIF12Q96FN5 646 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 AURKBQ96GD4 344 aaPredicted RBP8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 ZNF251Q9BRH9 671 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 ZNF556Q9HAH1 456 aa8.88□□□□□ -0.99
GTF2A1-203ENST00000553612 ZNF282Q9UDV7 671 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms