RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 RANBP9Q96S59 729 aa9.53□□□□□ -0.88
TNFRSF1A-214ENST00000543048 INSM2Q96T92 566 aaPredicted RBP9.53□□□□□ -0.88
TNFRSF1A-214ENST00000543048 CCM2Q9BSQ5 444 aa9.53□□□□□ -0.88
TNFRSF1A-214ENST00000543048 ASPSCR1Q9BZE9 553 aa9.53□□□□□ -0.88
TNFRSF1A-214ENST00000543048 CASS4Q9NQ75 786 aa9.53□□□□□ -0.88
TNFRSF1A-214ENST00000543048 OCIAD1Q9NX40 245 aa9.53□□□□□ -0.88
TNFRSF1A-214ENST00000543048 TRMT1Q9NXH9 659 aaKnown RBP9.53□□□□□ -0.88
TNFRSF1A-214ENST00000543048 SLC39A1Q9NY26 324 aa9.53□□□□□ -0.88
TNFRSF1A-214ENST00000543048 OGFRQ9NZT2 677 aa9.53□□□□□ -0.88
TNFRSF1A-214ENST00000543048 RIMKLBQ9ULI2 386 aa9.53□□□□□ -0.88
TNFRSF1A-214ENST00000543048 PSMD13Q9UNM6 376 aa9.53□□□□□ -0.88
TNFRSF1A-214ENST00000543048 PCDHB11Q9Y5F2 797 aa9.53□□□□□ -0.88
TNFRSF1A-214ENST00000543048 PCDHGA3Q9Y5H0 932 aa9.53□□□□□ -0.88
TNFRSF1A-214ENST00000543048 IGLV3-16A0A075B6K0 115 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 EFCAB7A8K855 629 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 AP3B1O00203 1094 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 TOX3O15405 576 aaPredicted RBP9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 CAPN5O15484 640 aaPredicted RBP9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 AP2A2O94973 939 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 C9P02748 559 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 POLBP06746 335 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 APRTP07741 180 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 PRSS56P0CW18 603 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 LIPCP11150 499 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 GRIA1P42261 906 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 NPY2RP49146 381 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 MC2RQ01718 297 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 VAC14Q08AM6 782 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 GPR18Q14330 331 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 CCDC38Q502W7 563 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 DCAF12Q5T6F0 453 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 TSTD2Q5T7W7 516 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 LYPLAL1Q5VWZ2 237 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 ZNF449Q6P9G9 518 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 ZFAND4Q86XD8 727 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 FAM129CQ86XR2 697 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 NAT14Q8WUY8 206 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 HDAC10Q969S8 669 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 ZDHHC12Q96GR4 267 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 C9orf72Q96LT7 481 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 FCRL3Q96P31 734 aaPredicted RBP9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 CCNL2Q96S94 520 aaPredicted RBP9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 SPSB2Q99619 263 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 DDA1Q9BW61 102 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 RAB33BQ9H082 229 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 WWP1Q9H0M0 922 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 CPNE5Q9HCH3 593 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 FBXO8Q9NRD0 319 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 SMARCAL1Q9NZC9 954 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 FOXJ2Q9P0K8 574 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 EPHA6Q9UF33 1036 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 KLHL3Q9UH77 587 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 COLEC10Q9Y6Z7 277 aa9.52□□□□□ -0.89
TNFRSF1A-214ENST00000543048 TEX51A0A1B0GUA7 166 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 CCDC78A2IDD5 438 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 CCDC162PA2VCL2 907 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 SNRNP200O75643 2136 aaKnown RBP9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 S1PR4O95977 384 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 GSTM1P09488 218 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 ANKRD34CP0C6C1 535 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 SLC35G4P0C7Q5 338 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 MTHFD1P11586 935 aaKnown RBP9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 NSG1P42857 185 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 PRLHRP49683 370 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 ARSDP51689 593 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 RAB15P59190 212 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 GSTM4Q03013 218 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 KRT33BQ14525 404 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 ITIH4Q14624 930 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 TGIF1Q15583 401 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 DBN1Q16643 649 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 SOWAHCQ53LP3 525 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 PCID2Q5JVF3 399 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 ARHGAP40Q5TG30 622 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 CAPRIN2Q6IMN6 1127 aaKnown RBP9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 KLHL35Q6PF15 583 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 CEACAM20Q6UY09 585 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 CCDC81Q6ZN84 652 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 PIANPQ8IYJ0 282 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 RASGEF1CQ8N431 466 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 BMPERQ8N8U9 685 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 PRELID2Q8N945 189 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 OR6P1Q8NGX9 317 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 OR4L1Q8NH43 312 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 HM13Q8TCT9 377 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 PEX13Q92968 403 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 ART4Q93070 314 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 C12orf66Q96MD2 445 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 TGM7Q96PF1 710 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 TEFMQ96QE5 360 aaKnown RBP9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 NAP1L3Q99457 506 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 TTC1Q99614 292 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 ZPBPQ9BS86 351 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 VPS37BQ9H9H4 285 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 EIF2B3Q9NR50 452 aaKnown RBP9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 BFARQ9NZS9 450 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 FAM8A1Q9UBU6 413 aa9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 TTC7AQ9ULT0 858 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF1A-214ENST00000543048 HEBP2Q9Y5Z4 205 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms