RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 ZNF569Q5MCW4 686 aa10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 ATL3Q6DD88 541 aa10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 WDR59Q6PJI9 974 aa10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 SHISA6Q6ZSJ9 500 aa10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 TRAPPC5Q8IUR0 188 aa10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 ZNF547Q8IVP9 402 aa10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 FAM71AQ8IYT1 594 aa10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 DNAAF3Q8N9W5 541 aa10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 LPCAT1Q8NF37 534 aa10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 N4BP2L2Q92802 583 aaPredicted RBP10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 SMARCE1Q969G3 411 aa10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 GSDMAQ96QA5 445 aa10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 TRIM56Q9BRZ2 755 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 TIMM29Q9BSF4 260 aa10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.7□□□□□ -0.72e-8■■■□□ 15.5
CTNNA1-234ENST00000522227 NT5MQ9NPB1 228 aa10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 PKD2L2Q9NZM6 624 aa10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 MEMO1Q9Y316 297 aa10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 LUC7L2Q9Y383 392 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-234ENST00000522227 FAM237AA0A1B0GTK4 181 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 DYTNA2CJ06 578 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 GSAPA4D1B5 854 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 FAM227AF5H4B4 570 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 CHUKO15111 745 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 CDK14O94921 469 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 RASAL1O95294 804 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 LSM8O95777 96 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 GNA14O95837 355 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 UQCRHP07919 91 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 ST6GAL1P15907 406 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 HSPA9P38646 679 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 MYBPHQ13203 477 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 XRCC4Q13426 336 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 DSG2Q14126 1118 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 CAMK4Q16566 473 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 LONRF1Q17RB8 773 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 DEFB110Q30KQ9 67 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 KHDC1Q4VXA5 237 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 AGAP9Q5VTM2 703 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 WASH2PQ6VEQ5 465 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 GPR135Q8IZ08 494 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 BBS5Q8N3I7 341 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 SLC20A1Q8WUM9 679 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 CCDC34Q96HJ3 373 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 C17orf62Q9BQA9 187 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 MGME1Q9BQP7 344 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 SPRTNQ9H040 489 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 TSPAN10Q9H1Z9 355 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 ABI3Q9P2A4 366 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 AP4E1Q9UPM8 1137 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 PLEKHA6Q9Y2H5 1048 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 FN1P02751 2386 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 AKAP6Q13023 2319 aa10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 FLNAP21333 2647 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-234ENST00000522227 NBEAL1Q6ZS30 2694 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 TRAV17A0A0B4J275 112 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 K7ELQ4 463 aaPredicted RBP10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 SOCS6O14544 535 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 ZWINTO95229 277 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 SMC2O95347 1197 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 CRYABP02511 175 aaKnown RBP10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 HBQ1P09105 142 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 VCLP18206 1134 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 MMP13P45452 471 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 DCDP81605 110 aaKnown RBP10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 PPP6R3Q5H9R7 873 aaPredicted RBP10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 ACBD4Q8NC06 268 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 ANKRD20A12PQ8NF67 263 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 OR4E2Q8NGC2 313 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 ZNF599Q96NL3 588 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 KCTD15Q96SI1 283 aaPredicted RBP10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 MESP1Q9BRJ9 268 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 VPS16Q9H269 839 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 CLSTN2Q9H4D0 955 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 IRAK4Q9NWZ3 460 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 DNAJB12Q9NXW2 375 aaKnown RBP10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 PTGFRNQ9P2B2 879 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 FAM8A1Q9UBU6 413 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 TTLL3Q9Y4R7 772 aa10.68□□□□□ -0.7
CTNNA1-234ENST00000522227 PCM1Q15154 2024 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 NKX2-6A6NCS4 301 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 FAM90A27PA6NNH2 459 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 FZD6O60353 706 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 PRAMEF2O60811 474 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 GADD45BO75293 160 aaPredicted RBP10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 PEX11BO96011 259 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 CTSBP07858 339 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 INHBBP09529 407 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 MMP8P22894 467 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 MMP11P24347 488 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 TNFSF10P50591 281 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 DGKQP52824 942 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 DSC2Q02487 901 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 DMPKQ09013 629 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 PRKAA1Q13131 559 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 IHHQ14623 411 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 TUBB8Q3ZCM7 444 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 NKAIN1Q4KMZ8 207 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 CES4AQ5XG92 561 aa10.67□□□□□ -0.7
CTNNA1-234ENST00000522227 KIRREL2Q6UWL6 708 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms