RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 DEPDC7Q96QD5 511 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 INSM2Q96T92 566 aaPredicted RBP11.41□□□□□ -0.58
UBA3-211ENST00000493957 NRTNQ99748 197 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 CCM2Q9BSQ5 444 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 SEMA6CQ9H3T2 930 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 COG4Q9H9E3 785 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 SARS2Q9NP81 518 aaKnown RBP11.41□□□□□ -0.58
UBA3-211ENST00000493957 WASH6PQ9NQA3 447 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 KCNK4Q9NYG8 393 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 RPS6KL1Q9Y6S9 549 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 WDFY3Q8IZQ1 3526 aa11.41□□□□□ -0.58
UBA3-211ENST00000493957 FREM2Q5SZK8 3169 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 SDK2Q58EX2 2172 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 FAM187AA6NFU0 413 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 XRCC1P18887 633 aaPredicted RBP11.4□□□□□ -0.58
UBA3-211ENST00000493957 MPSTP25325 297 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 CSE1LP55060 971 aaKnown RBP11.4□□□□□ -0.58
UBA3-211ENST00000493957 GPR18Q14330 331 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 FASTKD3Q14CZ7 662 aaKnown RBP11.4□□□□□ -0.58
UBA3-211ENST00000493957 MORF4L2Q15014 288 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 MAP9Q49MG5 647 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 CTSL3PQ5NE16 218 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 LYPLAL1Q5VWZ2 237 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 CERS6Q6ZMG9 384 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 PCGF5Q86SE9 256 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 DENND6AQ8IWF6 608 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 TRIM48Q8IWZ4 208 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 MDM1Q8TC05 714 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 HM13Q8TCT9 377 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 HEXDCQ8WVB3 486 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 SLC38A3Q99624 504 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 P2RY12Q9H244 342 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 SLC40A1Q9NP59 571 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 IMP3Q9NV31 184 aaKnown RBP11.4□□□□□ -0.58
UBA3-211ENST00000493957 GRHL1Q9NZI5 618 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 OGFRQ9NZT2 677 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 SLC17A6Q9P2U8 582 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 ANAPC5Q9UJX4 755 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 CHMP2BQ9UQN3 213 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 ASPMQ8IZT6 3477 aa11.4□□□□□ -0.58
UBA3-211ENST00000493957 DMXL2Q8TDJ6 3036 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 UBA6A0AVT1 1052 aaPredicted RBP11.39□□□□□ -0.59
UBA3-211ENST00000493957 OR5K4A6NMS3 321 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 KCNJ13O60928 360 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 TCEA3O75764 348 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 USP1O94782 785 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 AP2A2O94973 939 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 VIPP01282 170 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 CAPNS1P04632 268 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 MPOP05164 745 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 MTHFD1P11586 935 aaKnown RBP11.39□□□□□ -0.59
UBA3-211ENST00000493957 SLC2A4P14672 509 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 TYRP1P17643 537 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 CCR7P32248 378 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 ELK3P41970 407 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 GPR3P46089 330 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 EIF3BP55884 814 aaKnown RBP11.39□□□□□ -0.59
UBA3-211ENST00000493957 SLC7A5Q01650 507 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 CKAP4Q07065 602 aaKnown RBP11.39□□□□□ -0.59
UBA3-211ENST00000493957 CTBP1Q13363 440 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 BOP1Q14137 746 aaKnown RBP11.39□□□□□ -0.59
UBA3-211ENST00000493957 CRYMQ14894 314 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 TYSND1Q2T9J0 566 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 C3orf38Q5JPI3 329 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 DUPD1Q68J44 220 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 ZNF470Q6ECI4 717 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 CAPRIN2Q6IMN6 1127 aaKnown RBP11.39□□□□□ -0.59
UBA3-211ENST00000493957 TMEM26Q6ZUK4 368 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 CENPUQ71F23 418 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 ANKMY2Q8IV38 441 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 VRK3Q8IV63 474 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 SLITRK4Q8IW52 837 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 CACTIN-AS1Q8N1I8 211 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 ELMO1Q92556 727 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 LPGAT1Q92604 370 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 CXorf40BQ96DE9 158 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 CFAP36Q96G28 342 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 C12orf66Q96MD2 445 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 EBNA1BP2Q99848 306 aaKnown RBP11.39□□□□□ -0.59
UBA3-211ENST00000493957 ERP44Q9BS26 406 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 OR52A5Q9H2C5 316 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 EPB41L5Q9HCM4 733 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 POT1Q9NUX5 634 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 SATB2Q9UPW6 733 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 MRFAP1Q9Y605 127 aa11.39□□□□□ -0.59
UBA3-211ENST00000493957 URB1O60287 2271 aaKnown RBP11.39□□□□□ -0.59
UBA3-211ENST00000493957 ANKRD11Q6UB99 2663 aaPredicted RBP11.39□□□□□ -0.59
UBA3-211ENST00000493957 AHCTF1Q8WYP5 2266 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 IGHV5-10-1A0A0J9YXX1 117 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 C17orf113A0A1B0GUU1 675 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 ESYT3A0FGR9 886 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 SLC5A10A0PJK1 596 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 LILRA5A6NI73 299 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 PRMT5O14744 637 aaPredicted RBP11.38□□□□□ -0.59
UBA3-211ENST00000493957 NIPSNAP2O75323 286 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 NDUFS3O75489 264 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 CPNE6O95741 557 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 FTH1P02794 183 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 SLC35G4P0C7Q5 338 aa11.38□□□□□ -0.59
UBA3-211ENST00000493957 OR56A5P0C7T3 313 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms