RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 HERC2P3Q9BVR0 1158 aa11.57□□□□□ -0.56
PDZRN3-203ENST00000462146 AKIP1Q9NQ31 210 aa11.57□□□□□ -0.56
PDZRN3-203ENST00000462146 POLE4Q9NR33 117 aa11.57□□□□□ -0.56
PDZRN3-203ENST00000462146 COMMD8Q9NX08 183 aa11.57□□□□□ -0.56
PDZRN3-203ENST00000462146 MTRRQ9UBK8 725 aa11.57□□□□□ -0.56
PDZRN3-203ENST00000462146 ADGRE2Q9UHX3 823 aa11.57□□□□□ -0.56
PDZRN3-203ENST00000462146 NUP214P35658 2090 aaPredicted RBP11.57□□□□□ -0.56
PDZRN3-203ENST00000462146 ANKRD28O15084 1053 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 TBC1D4O60343 1298 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 FGF1P05230 155 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 PFKLP17858 780 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 GRK4P32298 578 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 RGRP47804 291 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 NR6A1Q15406 480 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 SLC39A12Q504Y0 691 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 LAIR1Q6GTX8 287 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 PHACTR4Q8IZ21 702 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 C10orf111Q8N326 155 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 ZNF555Q8NEP9 628 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 LINGO1Q96FE5 620 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 AURKBQ96GD4 344 aaPredicted RBP11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 C1orf74Q96LT6 269 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 TRIM62Q9BVG3 475 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 POLR1EQ9GZS1 481 aaKnown RBP11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 SEPT3Q9UH03 358 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 TLR6Q9Y2C9 796 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 GNGT2O14610 69 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 STX16O14662 325 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 KLK8O60259 260 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 MGEA5O60502 916 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 RAMP2O60895 175 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 MITFO75030 526 aaPredicted RBP11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 UGT2B11O75310 529 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 NDUFS3O75489 264 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 SOAT2O75908 522 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 PRKD3O94806 890 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 HOXD12P35452 270 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 MAP2K4P45985 399 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 PLXNA3P51805 1871 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 ISL1P61371 349 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 TRIM32Q13049 653 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 ZNF235Q14590 738 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 ABRAXAS2Q15018 415 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 CTSL3PQ5NE16 218 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 TTC23Q5W5X9 447 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 OR2T12Q8NG77 320 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 CCDC97Q96F63 343 aaPredicted RBP11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 MAGED4Q96JG8 741 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 RPRD1AQ96P16 312 aaPredicted RBP11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 MROQ9BYG7 248 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 BPIFA1Q9NP55 256 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 A0A0D9SEW6 157 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 LOC100130705A0A1B0GUX0 176 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 SYCE1LA8MT33 242 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 KPNA4O00629 521 aaPredicted RBP11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 LSM1O15116 133 aaKnown RBP11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 GSTA4O15217 222 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 AQP9O43315 295 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 NDUFS2O75306 463 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 MLYCDO95822 493 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 HLA-DPA1P20036 260 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 ZNF140P52738 457 aaPredicted RBP11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 VBP1P61758 197 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 EMX1Q04741 257 aaPredicted RBP11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 SERINC3Q13530 473 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 PWP1Q13610 501 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 ZNF846Q147U1 533 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 PGS1Q32NB8 556 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 ADPRMQ3LIE5 342 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 C1QTNF12Q5T7M4 302 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 TXNDC11Q6PKC3 985 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 NECAB2Q7Z6G3 386 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 GALNT5Q7Z7M9 940 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 CFAP52Q8N1V2 620 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 TTC9BQ8N6N2 239 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 ZNF548Q8NEK5 533 aaPredicted RBP11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 METTL6Q8TCB7 284 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 FAR1Q8WVX9 515 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 NODALQ96S42 347 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 BARD1Q99728 777 aaKnown RBP11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 FEM1AQ9BSK4 669 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 THUMPD3Q9BV44 507 aaKnown RBP11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 C1QTNF3Q9BXJ4 246 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 ATP13A3Q9H7F0 1226 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 ACTR8Q9H981 624 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 SLC6A13Q9NSD5 602 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 PMF1-BGLAPU3KQ54 211 aa11.56□□□□□ -0.56
PDZRN3-203ENST00000462146 HTR3EA5X5Y0 456 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 C16orf96A6NNT2 1141 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 HPRP00739 348 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 CYP11A1P05108 521 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 OR1E1P30953 314 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 FMO3P31513 532 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 TMED10P49755 219 aaKnown RBP11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 MRPS6P82932 125 aaKnown RBP11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 TSPY1Q01534 308 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 IL10RBQ08334 325 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 MAPK11Q15759 364 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 CCL14Q16627 93 aa11.55□□□□□ -0.56
PDZRN3-203ENST00000462146 AP5B1Q2VPB7 878 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms