RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 DENND5AQ6IQ26 1287 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 PMF1Q6P1K2 205 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 KIAA1324Q6UXG2 1013 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 NPNTQ6UXI9 565 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 NDUFAF7Q7L592 441 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 PRICKLE2Q7Z3G6 844 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 ZNF589Q86UQ0 364 aaPredicted RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 HORMAD1Q86X24 394 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 CNGA4Q8IV77 575 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 ADGRF2Q8IZF7 708 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 HDDC3Q8N4P3 179 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 OR8K5Q8NH50 307 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 LKAAEAR1Q8TD35 194 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 CD300LFQ8TDQ1 290 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 CREB3L4Q8TEY5 395 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 UFD1Q92890 307 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 OTUB2Q96DC9 234 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 PDXPQ96GD0 296 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 PDLIM5Q96HC4 596 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 TMEM169Q96HH4 297 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 LRIG1Q96JA1 1093 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 SERAC1Q96JX3 654 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 ZNF641Q96N77 438 aaPredicted RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 DBNDD2Q9BQY9 259 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 PRRG3Q9BZD7 231 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 PCED1AQ9H1Q7 454 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 MTIF3Q9H2K0 278 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 PPA2Q9H2U2 334 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 OR51M1Q9H341 326 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 TASP1Q9H6P5 420 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 SLA2Q9H6Q3 261 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 DCLRE1BQ9H816 532 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 CNTD2Q9H8S5 307 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 UNKLQ9H9P5 680 aaKnown RBP4.91□□□□□ -1.62
EPHA3-202ENST00000452448 TMEM39AQ9NV64 488 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 MLXQ9UH92 298 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 OGDHLQ9ULD0 1010 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 PPM1HQ9ULR3 514 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 MFHAS1Q9Y4C4 1052 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 UGT2A1Q9Y4X1 527 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 NWD2Q9ULI1 1742 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 TUBGCP6Q96RT7 1819 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 GLI3P10071 1580 aa4.91□□□□□ -1.62
EPHA3-202ENST00000452448 FAM208AQ9UK61 1670 aaKnown RBP4.9□□□□□ -1.62
EPHA3-202ENST00000452448 XRN1Q8IZH2 1706 aaKnown RBP4.9□□□□□ -1.62
EPHA3-202ENST00000452448 PEAK1Q9H792 1746 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 TCRBV16S1A1N1A0A5B0 115 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 TRABD2BA6NFA1 517 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 FAM25AB3EWG3 89 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 FAM25CB3EWG5 89 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 FAM25GB3EWG6 89 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 ARVCFO00192 962 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 FFAR2O15552 330 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 CALUO43852 315 aaPredicted RBP4.9□□□□□ -1.62
EPHA3-202ENST00000452448 RPP40O75818 363 aaKnown RBP4.9□□□□□ -1.62
EPHA3-202ENST00000452448 UBOX5O94941 541 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 VAMP5O95183 116 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 IGHV2-70P01814 119 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 GSNP06396 782 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 HCKP08631 526 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 H2AFB2P0C5Z0 115 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 MCF2P10911 925 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 CDH1P12830 882 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 CD1EP15812 388 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 NELFEP18615 380 aaKnown RBP4.9□□□□□ -1.62
EPHA3-202ENST00000452448 ITIH2P19823 946 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 ACVR2AP27037 513 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 HOXA9P31269 272 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 CXCR5P32302 372 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 CDKN2CP42773 168 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 NSFP46459 744 aaKnown RBP4.9□□□□□ -1.62
EPHA3-202ENST00000452448 EPHB4P54760 987 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 SOX10P56693 466 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 WNT7BP56706 349 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 ACTBP60709 375 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 AP1S1P61966 158 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 ACTA2P62736 377 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 ACTG1P63261 375 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 ACTG2P63267 376 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 ACTC1P68032 377 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 ACTA1P68133 377 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 HTRA4P83105 476 aaPredicted RBP4.9□□□□□ -1.62
EPHA3-202ENST00000452448 MRPL49Q13405 166 aaKnown RBP4.9□□□□□ -1.62
EPHA3-202ENST00000452448 MFSD13AQ14CX5 517 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 CDK10Q15131 360 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 KCNMB1Q16558 191 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 DUOXA2Q1HG44 320 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 HIKESHIQ53FT3 197 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 NOMO2Q5JPE7 1267 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 TCHHL1Q5QJ38 904 aaPredicted RBP4.9□□□□□ -1.62
EPHA3-202ENST00000452448 RIPPLY2Q5TAB7 128 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 C18orf63Q68DL7 685 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 CCDC137Q6PK04 289 aaKnown RBP4.9□□□□□ -1.62
EPHA3-202ENST00000452448 LRRC74BQ6ZQY2 392 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 OTOAQ7RTW8 1153 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 LDHDQ86WU2 507 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 PLCZ1Q86YW0 608 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 GSPT2Q8IYD1 628 aaKnown RBP4.9□□□□□ -1.62
EPHA3-202ENST00000452448 ZNF679Q8IYX0 411 aa4.9□□□□□ -1.62
EPHA3-202ENST00000452448 METTL4Q8N3J2 472 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms