RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 KLHL10Q6JEL2 608 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 Q6ZTK2 550 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 SEPT14Q6ZU15 432 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 MTSS1LQ765P7 747 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 HOOK3Q86VS8 718 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 IFT20Q8IY31 132 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 TAGAPQ8N103 731 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 MREGQ8N565 214 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 NECAB1Q8N987 351 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 TC2NQ8N9U0 490 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 CCDC197Q8NCU1 140 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 CFAP61Q8NHU2 1237 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 AENQ8WTP8 325 aaKnown RBP4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 TRIB2Q92519 343 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 ERGIC1Q969X5 290 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 LRRC45Q96CN5 670 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 RRNAD1Q96FB5 475 aaKnown RBP4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 URB1-AS1Q96HZ7 61 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 FEM1CQ96JP0 617 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 ATP6V1G3Q96LB4 118 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 HARBI1Q96MB7 349 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 NAP1L3Q99457 506 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 DESI2Q9BSY9 194 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 KRT23Q9C075 422 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 FAM192AQ9GZU8 254 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 STMN4Q9H169 189 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 CLK4Q9HAZ1 481 aaKnown RBP4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 PLAC1Q9HBJ0 212 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 MKKSQ9NPJ1 570 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 ECHDC1Q9NTX5 307 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 CLIC5Q9NZA1 410 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 OR6C3Q9NZP0 311 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 LARSQ9P2J5 1176 aaKnown RBP4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 SUCLA2Q9P2R7 463 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 BAIAP2L1Q9UHR4 511 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 TUBE1Q9UJT0 475 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 TMCO1Q9UM00 188 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 SNX8Q9Y5X2 465 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 STON1Q9Y6Q2 735 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 RPS6KL1Q9Y6S9 549 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 LAMB1P07942 1786 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 NPATQ14207 1427 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 POGZQ7Z3K3 1410 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 NWD1Q149M9 1564 aa4.44□□□□□ -1.7
HMGB1P16-201ENST00000447155 A2ML1A8K2U0 1454 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 ANKRD36CQ5JPF3 1778 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 NFAT5O94916 1531 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 USP54Q70EL1 1684 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 B4DLN1 442 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 TIMM44O43615 452 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 MGRN1O60291 552 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 TMCC2O75069 709 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 RB1P06400 928 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 RPSAP08865 295 aaKnown RBP4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 PAEPP09466 180 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 CLTBP09497 229 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 PDHBP11177 359 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 PSG1P11464 419 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 PFKFB1P16118 471 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 NAGAP17050 411 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 TCP1P17987 556 aaKnown RBP4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 GABRB1P18505 474 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 CMA1P23946 247 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 MDH1P40925 334 aaKnown RBP4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 PSMC4P43686 418 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 RFX2P48378 723 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 RAD23BP54727 409 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 SNX16P57768 344 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 TRIM29Q14134 588 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 IRF3Q14653 427 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 PPP1R7Q15435 360 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 MMEL1Q495T6 779 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 HIST2H2BCQ6DN03 193 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 HIST2H2BDQ6DRA6 164 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 DLK2Q6UY11 383 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 PQLC2Q6ZP29 291 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 ENOSF1Q7L5Y1 443 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 CD302Q8IX05 232 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 HACE1Q8IYU2 909 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 MMGT1Q8N4V1 131 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 MIGA1Q8NAN2 632 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 OR14L1PQ8NHC6 308 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 MAIP1Q8WWC4 291 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 OPTNQ96CV9 577 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 OLFM3Q96PB7 478 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 NEK1Q96PY6 1258 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 USP28Q96RU2 1077 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 TSPAN18Q96SJ8 248 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 SEPT5Q99719 369 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 LZTS2Q9BRK4 669 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 TCHPQ9BT92 498 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 FSD1Q9BTV5 496 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 MMADHCQ9H3L0 296 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 MRPL44Q9H9J2 332 aaKnown RBP4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 GPR108Q9NPR9 543 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 RNF14Q9UBS8 474 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 PAIP2BQ9ULR5 123 aaKnown RBP4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 PCDHGB4Q9UN71 923 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 WDR37Q9Y2I8 494 aa4.43□□□□□ -1.7
HMGB1P16-201ENST00000447155 PAM16Q9Y3D7 125 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms