RNA–Protein interactions for RNA: ENST00000371608.6

BCAS4-202, Transcript of breast carcinoma amplified sequence 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene BCAS4, Length 6,680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-202ENST00000371608 RAB11FIP5Q9BXF6 653 aa12.66□□□□□ -0.38
BCAS4-202ENST00000371608 MRPL39Q9NYK5 338 aaKnown RBP12.66□□□□□ -0.38
BCAS4-202ENST00000371608 SNED1Q8TER0 1413 aa12.66□□□□□ -0.38
BCAS4-202ENST00000371608 FAM227AF5H4B4 570 aa12.66□□□□□ -0.38
BCAS4-202ENST00000371608 COX4I1P13073 169 aa12.66□□□□□ -0.38
BCAS4-202ENST00000371608 NDUFS1P28331 727 aa12.66□□□□□ -0.38
BCAS4-202ENST00000371608 GABRB2P47870 512 aa12.66□□□□□ -0.38
BCAS4-202ENST00000371608 NAA20P61599 178 aa12.66□□□□□ -0.38
BCAS4-202ENST00000371608 TMC8Q8IU68 726 aa12.66□□□□□ -0.38
BCAS4-202ENST00000371608 TWIST2Q8WVJ9 160 aa12.66□□□□□ -0.38
BCAS4-202ENST00000371608 NECTIN4Q96NY8 510 aa12.66□□□□□ -0.38
BCAS4-202ENST00000371608 NPAS2Q99743 824 aa12.66□□□□□ -0.38
BCAS4-202ENST00000371608 SMOQ99835 787 aa12.66□□□□□ -0.38
BCAS4-202ENST00000371608 NTPCRQ9BSD7 190 aaKnown RBP12.66□□□□□ -0.38
BCAS4-202ENST00000371608 CCM2Q9BSQ5 444 aa12.66□□□□□ -0.38
BCAS4-202ENST00000371608 ZSCAN5AQ9BUG6 496 aa12.66□□□□□ -0.38
BCAS4-202ENST00000371608 RBCK1Q9BYM8 510 aa12.66□□□□□ -0.38
BCAS4-202ENST00000371608 WDR55Q9H6Y2 383 aaPredicted RBP12.66□□□□□ -0.38
BCAS4-202ENST00000371608 DTLQ9NZJ0 730 aa12.66□□□□□ -0.38
BCAS4-202ENST00000371608 PTGFRNQ9P2B2 879 aa12.66□□□□□ -0.38
BCAS4-202ENST00000371608 MRPS7Q9Y2R9 242 aaKnown RBP12.66□□□□□ -0.38
BCAS4-202ENST00000371608 PI15O43692 258 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 RBMS1P29558 406 aaKnown RBP12.65□□□□□ -0.38
BCAS4-202ENST00000371608 KIR3DL1P43629 444 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 PSME3P61289 254 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 MS4A13Q5J8X5 152 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 USP53Q70EK8 1073 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 SETD9Q8NE22 299 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 C19orf60Q96EN9 201 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 PPM1MQ96MI6 270 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 DGCR6LQ9BY27 220 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 CLN6Q9NWW5 311 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 KLRF1Q9NZS2 232 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 SLC17A7Q9P2U7 560 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 AP3M1Q9Y2T2 418 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 CHRNB2P17787 502 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 NCBP2P52298 156 aaKnown RBP eCLIP12.65□□□□□ -0.38
BCAS4-202ENST00000371608 ELOCQ15369 112 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 ZSWIM7Q19AV6 140 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 IL23RQ5VWK5 629 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 PHC3Q8NDX5 983 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 BPIFB6Q8NFQ5 453 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 FAM81AQ8TBF8 368 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 A0A0D9SEW6 157 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 NIPSNAP2O75323 286 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 CNTN5O94779 1100 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 NOL4O94818 638 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 DUSP3P51452 185 aaPredicted RBP12.65□□□□□ -0.38
BCAS4-202ENST00000371608 PDX1P52945 283 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 DEFB103AP81534 67 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 CLCQ05315 142 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 LPCAT2Q7L5N7 544 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 SLC29A4Q7RTT9 530 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 C7orf43Q8WVR3 580 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 ACSS3Q9H6R3 686 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 L2HGDHQ9H9P8 463 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 LMAN1LQ9HAT1 526 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 LOC100506127A0A0U1RQW1 187 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 LEFTY1O75610 366 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 LGALS3BPQ08380 585 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 SIRPB2Q5JXA9 342 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 ZNF648Q5T619 568 aaPredicted RBP12.65□□□□□ -0.38
BCAS4-202ENST00000371608 SULT1C3Q6IMI6 304 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 SLC30A6Q6NXT4 461 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 GK5Q6ZS86 529 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 EXOC3L1Q86VI1 746 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 PARP8Q8N3A8 854 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 PTCD2Q8WV60 388 aaKnown RBP12.65□□□□□ -0.38
BCAS4-202ENST00000371608 TMEM125Q96AQ2 219 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 RCN3Q96D15 328 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 SLC47A1Q96FL8 570 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 FLRT1Q9NZU1 646 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.65□□□□□ -0.38
BCAS4-202ENST00000371608 CDC7O00311 574 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 HDAC3O15379 428 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 ALOX5P09917 674 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 GJA5P36382 358 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 YAP1P46937 504 aaKnown RBP12.65□□□□□ -0.38
BCAS4-202ENST00000371608 PSMD4P55036 377 aaKnown RBP12.65□□□□□ -0.38
BCAS4-202ENST00000371608 CSTF1Q05048 431 aaKnown RBP12.65□□□□□ -0.38
BCAS4-202ENST00000371608 VPS26BQ4G0F5 336 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 KLHL24Q6TFL4 600 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 ALYREFQ86V81 257 aaKnown RBP12.65□□□□□ -0.38
BCAS4-202ENST00000371608 PLA2G15Q8NCC3 412 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 ACMSDQ8TDX5 336 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 TBL1XR1Q9BZK7 514 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 SH3GLB1Q9Y371 365 aa12.65□□□□□ -0.38
BCAS4-202ENST00000371608 TNFRSF10BO14763 440 aa12.64□□□□□ -0.39
BCAS4-202ENST00000371608 ERI3O43414 337 aaKnown RBP12.64□□□□□ -0.39
BCAS4-202ENST00000371608 KAT7O95251 611 aa12.64□□□□□ -0.39
BCAS4-202ENST00000371608 HEXBP07686 556 aa12.64□□□□□ -0.39
BCAS4-202ENST00000371608 PIM1P11309 404 aaPredicted RBP12.64□□□□□ -0.39
BCAS4-202ENST00000371608 USP46P62068 366 aa12.64□□□□□ -0.39
BCAS4-202ENST00000371608 SPIRE1Q08AE8 756 aa12.64□□□□□ -0.39
BCAS4-202ENST00000371608 ZNF514Q96K75 400 aaPredicted RBP12.64□□□□□ -0.39
BCAS4-202ENST00000371608 TGM7Q96PF1 710 aa12.64□□□□□ -0.39
BCAS4-202ENST00000371608 BTNL10A8MVZ5 291 aa12.64□□□□□ -0.39
BCAS4-202ENST00000371608 MAGEB3O15480 346 aa12.64□□□□□ -0.39
BCAS4-202ENST00000371608 RBMXL2O75526 392 aaKnown RBP12.64□□□□□ -0.39
BCAS4-202ENST00000371608 DLDP09622 509 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms