RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 SCGB1C1Q8TD33 95 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 ZNF558Q96NG5 402 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 FZD3Q9NPG1 666 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 SNX15Q9NRS6 342 aa16.22■□□□□ 0.19
PTCH1-201ENST00000331920 DNMT1P26358 1616 aaKnown RBP16.22■□□□□ 0.19
PTCH1-201ENST00000331920 TRIM64CA6NLI5 447 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 MAT2AP31153 395 aaKnown RBP16.21■□□□□ 0.19
PTCH1-201ENST00000331920 MAD2L1BPQ15013 274 aaPredicted RBP16.21■□□□□ 0.19
PTCH1-201ENST00000331920 SBK1Q52WX2 424 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 GALNT6Q8NCL4 622 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 LIN37Q96GY3 246 aaPredicted RBP16.21■□□□□ 0.19
PTCH1-201ENST00000331920 KCTD5Q9NXV2 234 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 ATXN10Q9UBB4 475 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 DAPL1A0PJW8 107 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 EDNRAP25101 427 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 EIF5AP63241 154 aaKnown RBP16.21■□□□□ 0.19
PTCH1-201ENST00000331920 C3orf33Q6P1S2 294 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 JAGN1Q8N5M9 183 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 FAM205AQ6ZU69 1335 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 RPLP2P05387 115 aaKnown RBP16.21■□□□□ 0.19
PTCH1-201ENST00000331920 CMPK1P30085 196 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 HECTD2Q5U5R9 776 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 RFWD3Q6PCD5 774 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 MFSD8Q8NHS3 518 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 NINJ1Q92982 152 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 FAM210AQ96ND0 272 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 TREX2Q9BQ50 279 aaPredicted RBP16.21■□□□□ 0.19
PTCH1-201ENST00000331920 RAP2CQ9Y3L5 183 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 TRAF6Q9Y4K3 522 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 A0A1B0GV50 99 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 A0A1W2PQ67 120 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 C9JVG2 144 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 ARPC2O15144 300 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 ZNF3P17036 446 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 METTL3Q86U44 580 aaKnown RBP16.21■□□□□ 0.19
PTCH1-201ENST00000331920 HEXDCQ8WVB3 486 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 WNT8BQ93098 351 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 SAMD9Q5K651 1589 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 CABYRO75952 493 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 S100PP25815 95 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 ROR2Q01974 943 aaKnown RBP16.21■□□□□ 0.19
PTCH1-201ENST00000331920 TARDBPQ13148 414 aaKnown RBP eCLIP16.21■□□□□ 0.19
PTCH1-201ENST00000331920 CARD16Q5EG05 197 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 ZNF598Q86UK7 904 aaKnown RBP16.21■□□□□ 0.19
PTCH1-201ENST00000331920 FUKQ8N0W3 1084 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 MAN2B2Q9Y2E5 1009 aa16.21■□□□□ 0.19
PTCH1-201ENST00000331920 SLC35F4A4IF30 521 aa16.21■□□□□ 0.18
PTCH1-201ENST00000331920 TGFB3P10600 412 aa16.21■□□□□ 0.18
PTCH1-201ENST00000331920 LRRC37A5PQ49AS3 106 aa16.21■□□□□ 0.18
PTCH1-201ENST00000331920 KIAA1161Q6NSJ0 714 aa16.21■□□□□ 0.18
PTCH1-201ENST00000331920 RHBDF2Q6PJF5 856 aa16.21■□□□□ 0.18
PTCH1-201ENST00000331920 SLC30A10Q6XR72 485 aa16.21■□□□□ 0.18
PTCH1-201ENST00000331920 PAQR7Q86WK9 346 aa16.21■□□□□ 0.18
PTCH1-201ENST00000331920 LACRTQ9GZZ8 138 aa16.21■□□□□ 0.18
PTCH1-201ENST00000331920 NMUR1Q9HB89 426 aa16.21■□□□□ 0.18
PTCH1-201ENST00000331920 E9PAM4 449 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 BCAS1O75363 584 aaPredicted RBP16.2■□□□□ 0.18
PTCH1-201ENST00000331920 ENTPD1P49961 510 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 ZNF676Q8N7Q3 588 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 ZSCAN4Q8NAM6 433 aaPredicted RBP16.2■□□□□ 0.18
PTCH1-201ENST00000331920 CDH19Q9H159 772 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 TIMM22Q9Y584 194 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 RFX7Q2KHR2 1363 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 ELOA3DA6NLF2 546 aaPredicted RBP16.2■□□□□ 0.18
PTCH1-201ENST00000331920 OR2AG2A6NM03 316 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 VSTM5A8MXK1 200 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 I3L521 148 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 SLC3A1Q07837 685 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 ELOA3BQ3SY89 546 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 ELOA3Q8NG57 546 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 NLRP1Q9C000 1473 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 UBXN7O94888 489 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 ITGA2BP08514 1039 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 CAP2P40123 477 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 CASRP41180 1078 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 DUSP4Q13115 394 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 RFTN2Q52LD8 501 aaPredicted RBP16.2■□□□□ 0.18
PTCH1-201ENST00000331920 C6orf183Q5T699 404 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 PRR23BQ6ZRT6 265 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 TXNRD3Q86VQ6 643 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 REPS2Q8NFH8 660 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 TIMMDC1Q9NPL8 285 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 ARHGAP20Q9P2F6 1191 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 PCDHGA12O60330 932 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 SLC26A2P50443 739 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 OR2B6P58173 313 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 HAGHLQ6PII5 290 aaPredicted RBP16.2■□□□□ 0.18
PTCH1-201ENST00000331920 GALNT13Q8IUC8 556 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 GPR151Q8TDV0 419 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 YIPF4Q9BSR8 244 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 SPATC1LQ9H0A9 340 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 EHD4Q9H223 541 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 WASF3Q9UPY6 502 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 TPPPO94811 219 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 TRUB2O95900 331 aaKnown RBP16.2■□□□□ 0.18
PTCH1-201ENST00000331920 PSEN1P49768 467 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 EIF5A2Q9GZV4 153 aaKnown RBP16.2■□□□□ 0.18
PTCH1-201ENST00000331920 MAGEE1Q9HCI5 957 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 TVP23BQ9NYZ1 205 aa16.2■□□□□ 0.18
PTCH1-201ENST00000331920 UMODL1Q5DID0 1318 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms