RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 TMEM59LQ9UK28 342 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 PRDM4Q9UKN5 801 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 SPATA2Q9UM82 520 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 BAZ2AQ9UIF9 1905 aaKnown RBP17■□□□□ 0.31
CDCP1-201ENST00000296129 ILVBLA1L0T0 632 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 ASLP04424 464 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 ETS2P15036 469 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 EFNA1P20827 205 aaPredicted RBP17■□□□□ 0.31
CDCP1-201ENST00000296129 HERVK_113P63132 956 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 RAPSNQ13702 412 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 ATP13A5Q4VNC0 1218 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 LCN9Q8WX39 176 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 CDK15Q96Q40 435 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 ERVK-6Q9BXR3 956 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 PRDM8Q9NQV8 689 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 RASSF1Q9NS23 344 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 GEMIN8Q9NWZ8 242 aaKnown RBP17■□□□□ 0.31
CDCP1-201ENST00000296129 EME2A4GXA9 379 aaPredicted RBP17■□□□□ 0.31
CDCP1-201ENST00000296129 FAM159BA6NKW6 160 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 SLC31A1O15431 190 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 WDR4P57081 412 aaKnown RBP17■□□□□ 0.31
CDCP1-201ENST00000296129 OLIG2Q13516 323 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 RIPK1Q13546 671 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 TXNDC8Q6A555 127 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 TMC5Q6UXY8 1006 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 CYP2U1Q7Z449 544 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 CROCCP3Q8IVE0 287 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 OR10A6Q8NH74 314 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 NUS1Q96E22 293 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 TEPSINQ96N21 525 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 PEBP4Q96S96 227 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 C1orf109Q9NX04 203 aa17■□□□□ 0.31
CDCP1-201ENST00000296129 NEMP2A6NFY4 417 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 UGT1A6P19224 532 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 UGT1A1P22309 533 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 UGT1A4P22310 534 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 UGT1A3P35503 534 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 UGT1A5P35504 534 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 SIM2Q14190 667 aaPredicted RBP16.99■□□□□ 0.31
CDCP1-201ENST00000296129 PITRM1Q5JRX3 1037 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 PAQR3Q6TCH7 311 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 ZNF730Q6ZMV8 503 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 ZBTB46Q86UZ6 589 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 HDDC3Q8N4P3 179 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 SUV39H2Q9H5I1 410 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 OXSMQ9NWU1 459 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 PCDHGB3Q9Y5G1 929 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 TNFRSF11BO00300 401 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 SLC11A1P49279 550 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 GPR135Q8IZ08 494 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 BCKDKO14874 412 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 ZNF24P17028 368 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 ITPKBP27987 946 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 GPX6P59796 221 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 PRKD1Q15139 912 aaPredicted RBP16.99■□□□□ 0.31
CDCP1-201ENST00000296129 PPP2R2DQ66LE6 453 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 RIPOR3Q96MK2 946 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 MAP10Q9P2G4 905 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 A0A1W2PQ45 241 aaPredicted RBP16.99■□□□□ 0.31
CDCP1-201ENST00000296129 A0A1W2PQY0 241 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 GMFGO60234 142 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 COL6A1P12109 1028 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 GDPD4Q6W3E5 623 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 SRFBP1Q8NEF9 429 aaKnown RBP16.99■□□□□ 0.31
CDCP1-201ENST00000296129 OR52J3Q8NH60 311 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 ZCCHC10Q8TBK6 192 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 SH3GLB1Q9Y371 365 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 SESN1Q9Y6P5 492 aa16.99■□□□□ 0.31
CDCP1-201ENST00000296129 LRRC72A6NJI9 287 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 H3BNH8 94 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 PRPS2P11908 318 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 PAFAH1B3Q15102 231 aaKnown RBP16.98■□□□□ 0.31
CDCP1-201ENST00000296129 MSS51Q4VC12 460 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 FAAH2Q6GMR7 532 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 CYB5D2Q8WUJ1 264 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 DNASE1L2Q92874 299 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 ACDQ96AP0 544 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 EXO5Q9H790 373 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 PHRF1Q9P1Y6 1649 aaKnown RBP16.98■□□□□ 0.31
CDCP1-201ENST00000296129 MAGEB17A8MXT2 336 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 MCIDASD6RGH6 385 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 MFN2O95140 757 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 ADSLP30566 484 aaPredicted RBP16.98■□□□□ 0.31
CDCP1-201ENST00000296129 SLC5A9Q2M3M2 681 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 NDUFAF6Q330K2 333 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 HDDC2Q7Z4H3 204 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 C8orf4Q9NR00 106 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 RAB26Q9ULW5 256 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 COMMD3-BMI1R4GMX3 469 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 CCL5P13501 91 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 IMPDH1P20839 514 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 SLC26A3P40879 764 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 PNLIPRP1P54315 467 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 PTPN5P54829 565 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 ILF3Q12906 894 aaKnown RBP eCLIP16.98■□□□□ 0.31
CDCP1-201ENST00000296129 NDUFA9Q16795 377 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 LYSMD3Q7Z3D4 306 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 PIK3C3Q8NEB9 887 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 WFIKKN2Q8TEU8 576 aa16.98■□□□□ 0.31
CDCP1-201ENST00000296129 C8orf48Q96LL4 319 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms