RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 DNTTP04053 509 aa17.81■□□□□ 0.44
VIM-201ENST00000224237 JUNP05412 331 aaKnown RBP17.81■□□□□ 0.44
VIM-201ENST00000224237 ENO2P09104 434 aaPredicted RBP17.81■□□□□ 0.44
VIM-201ENST00000224237 GLULP15104 373 aa17.81■□□□□ 0.44
VIM-201ENST00000224237 EPHA3P29320 983 aa17.81■□□□□ 0.44
VIM-201ENST00000224237 CTSCP53634 463 aa17.81■□□□□ 0.44
VIM-201ENST00000224237 SP140Q13342 867 aa17.81■□□□□ 0.44
VIM-201ENST00000224237 PHKG1Q16816 387 aa17.81■□□□□ 0.44
VIM-201ENST00000224237 AGAP11Q8TF27 550 aa17.81■□□□□ 0.44
VIM-201ENST00000224237 FAM131CQ96AQ9 280 aa17.81■□□□□ 0.44
VIM-201ENST00000224237 MSANTD3Q96H12 275 aa17.81■□□□□ 0.44
VIM-201ENST00000224237 NSL1Q96IY1 281 aa17.81■□□□□ 0.44
VIM-201ENST00000224237 GUCD1Q96NT3 240 aa17.81■□□□□ 0.44
VIM-201ENST00000224237 EGFL8Q99944 293 aa17.81■□□□□ 0.44
VIM-201ENST00000224237 SLC6A17Q9H1V8 727 aa17.81■□□□□ 0.44
VIM-201ENST00000224237 WDR55Q9H6Y2 383 aaPredicted RBP17.81■□□□□ 0.44
VIM-201ENST00000224237 MEAF6Q9HAF1 191 aa17.81■□□□□ 0.44
VIM-201ENST00000224237 SEMA4BQ9NPR2 832 aaPredicted RBP17.81■□□□□ 0.44
VIM-201ENST00000224237 ARL8BQ9NVJ2 186 aa17.81■□□□□ 0.44
VIM-201ENST00000224237 LNPEPQ9UIQ6 1025 aa17.81■□□□□ 0.44
VIM-201ENST00000224237 ANKRD12Q6UB98 2062 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 GOLGA8QA0A0J9YX86 632 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 A0A1W2PQF6 199 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 GOLGA8OA6NCC3 632 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 CFAP73A6NFT4 308 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 E9PBE3 544 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 GOLGA8NF8WBI6 632 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 KLHL41O60662 606 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 GPC4O75487 556 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 SKAP2O75563 359 aaPredicted RBP17.8■□□□□ 0.44
VIM-201ENST00000224237 GUCA1CO95843 209 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 FOSL2P15408 326 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 INHBCP55103 352 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 BTKQ06187 659 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 UBAP2LQ14157 1087 aaKnown RBP17.8■□□□□ 0.44
VIM-201ENST00000224237 AGERQ15109 404 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 LSM12Q3MHD2 195 aaKnown RBP17.8■□□□□ 0.44
VIM-201ENST00000224237 BCL7AQ4VC05 210 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 SULT1C3Q6IMI6 304 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 TMEM220Q6QAJ8 160 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 ASRGL1Q7L266 308 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 TMPRSS6Q8IU80 811 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 OR56A4Q8NGH8 313 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 SKA2Q8WVK7 121 aaPredicted RBP17.8■□□□□ 0.44
VIM-201ENST00000224237 DLG3Q92796 817 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 HLA-CQ95604 372 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 PTCD3Q96EY7 689 aaKnown RBP17.8■□□□□ 0.44
VIM-201ENST00000224237 CCM2Q9BSQ5 444 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 HGH1Q9BTY7 390 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 ZBTB26Q9HCK0 441 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 TRIM39Q9HCM9 518 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 FBXL12Q9NXK8 326 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 EIF2B4Q9UI10 523 aaKnown RBP17.8■□□□□ 0.44
VIM-201ENST00000224237 PTBP2Q9UKA9 531 aaKnown RBP17.8■□□□□ 0.44
VIM-201ENST00000224237 SCML1Q9UN30 329 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 IGLON5A6NGN9 336 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 GIPC1O14908 333 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 SLC16A5O15375 505 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 SLCO2B1O94956 709 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 AOC1P19801 751 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 NCF2P19878 526 aaPredicted RBP17.8■□□□□ 0.44
VIM-201ENST00000224237 COL9A1P20849 921 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 CD72P21854 359 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 GTF2H3Q13889 308 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 SMAD2Q15796 467 aaKnown RBP17.8■□□□□ 0.44
VIM-201ENST00000224237 FBXO43Q4G163 708 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 SYTL3Q4VX76 610 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 CDKL4Q5MAI5 379 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 CLEC6AQ6EIG7 209 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 METTL2BQ6P1Q9 378 aaKnown RBP17.8■□□□□ 0.44
VIM-201ENST00000224237 UBE2R2Q712K3 238 aaPredicted RBP17.8■□□□□ 0.44
VIM-201ENST00000224237 VRK3Q8IV63 474 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 TMEM159Q96B96 161 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 ZNF514Q96K75 400 aaPredicted RBP17.8■□□□□ 0.44
VIM-201ENST00000224237 SLC12A9Q9BXP2 914 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 LRMDAQ9H2I8 198 aa17.8■□□□□ 0.44
VIM-201ENST00000224237 SHISA7A6NL88 538 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 PRR5-ARHGAP8B1AHC4 643 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 PPP6CO00743 305 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 SDHDO14521 159 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 AZIN1O14977 448 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 VEGFDO43915 354 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 ANXA5P08758 320 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 ESRRAP11474 423 aaPredicted RBP17.79■□□□□ 0.44
VIM-201ENST00000224237 RPIAP49247 311 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 ARHGAP8P85298 464 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 CDKL1Q00532 357 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 KANK2Q63ZY3 851 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 ADAMTSL4Q6UY14 1074 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 ADGRG6Q86SQ4 1221 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 TRIM74Q86UV6 250 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 PACS2Q86VP3 889 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 TREML1Q86YW5 311 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 CEP70Q8NHQ1 597 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 GANCQ8TET4 914 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 ASB11Q8WXH4 323 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 GLMNQ92990 594 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 ESAMQ96AP7 390 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 RHBDF1Q96CC6 855 aa17.79■□□□□ 0.44
VIM-201ENST00000224237 HIC2Q96JB3 615 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms