RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 CNOT4O95628 575 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 APOC2P02655 101 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 IST1P53990 364 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 RPL6Q02878 288 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 RRP1BQ14684 758 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 OGFOD2Q6N063 350 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 GPRIN3Q6ZVF9 776 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 SPPL2CQ8IUH8 684 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 OR4L1Q8NH43 312 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 MYDGFQ969H8 173 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 RWDD3Q9Y3V2 267 aa16.82■□□□□ 0.28
CACNA1A-253ENST00000637927 ANXA2P2A6NMY6 339 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 RPLP2P05387 115 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 ANXA2P07355 339 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 ATP4AP20648 1035 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 CORO1AP31146 461 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 PLGLAQ15195 96 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 TBRG1Q3YBR2 411 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 HSDL2Q6YN16 418 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 ZNF567Q8N184 647 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 OR8H1Q8NGG4 311 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 APOLD1Q96LR9 279 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 VAT1Q99536 393 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 ZNF700Q9H0M5 742 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 C3orf14Q9HBI5 128 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 TMEM27Q9HBJ8 222 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 FAM105AQ9NUU6 356 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 PRAMEF33A0A0G2JMD5 474 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 PRAMEF10O60809 474 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 GNB3P16520 340 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 RGS8P57771 180 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 SIM2Q14190 667 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 INTS11Q5TA45 600 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 GPAT4Q86UL3 456 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 ECHDC2Q86YB7 292 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 SRFBP1Q8NEF9 429 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 ZNF639Q9UID6 485 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 HCN2Q9UL51 889 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 PTX3P26022 381 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 TTPAP49638 278 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 RAB10P61026 200 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 XKRXQ6PP77 449 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 ZNF570Q96NI8 536 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 ZNF395Q9H8N7 513 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 ITGA5P08648 1049 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 KLF1Q13351 362 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 ARFRP1Q13795 201 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 C17orf64Q86WR6 236 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 RBM18Q96H35 190 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 KLRF1Q9NZS2 232 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 MAGEC1O60732 1142 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 CPNE3O75131 537 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 PRAMEF17Q5VTA0 474 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 ZPBP2Q6X784 338 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 SRMSQ9H3Y6 488 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 TRPV5Q9NQA5 729 aa16.81■□□□□ 0.28
CACNA1A-253ENST00000637927 LIASO43766 372 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 CDC123O75794 336 aaPredicted RBP16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 CASRP41180 1078 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 TRMT5Q32P41 509 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 LNX1Q8TBB1 728 aaPredicted RBP16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 SLC25A23Q9BV35 468 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 SPATA7Q9P0W8 599 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 PDPK1O15530 556 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 SUV39H1O43463 412 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 PPM1BO75688 479 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 SNRPB2P08579 225 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 PURAQ00577 322 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 CLEC17AQ6ZS10 378 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 PRR18Q8N4B5 295 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 LCN9Q8WX39 176 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 MYO19Q96H55 970 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 Q96MT0 163 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 ZNF69Q9UC07 566 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 ZNF554Q86TJ5 538 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 GDAP2Q9NXN4 497 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 TESMINQ9Y4I5 508 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 ZFP37Q9Y6Q3 630 aaPredicted RBP16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 HSPA12AO43301 675 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 SERPINB7O75635 380 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 SSTP61278 116 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 GRIK2Q13002 908 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 RGMBQ6NW40 437 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 GPR151Q8TDV0 419 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 PRDM12Q9H4Q4 367 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 CARD8Q9Y2G2 431 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 A0A1W2PPL8 197 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 A6NL46 340 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 GATBO75879 557 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 PBX3P40426 434 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 MLLT10P55197 1068 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 PPA1Q15181 289 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 GPR68Q15743 365 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 CDKAL1Q5VV42 579 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 EIF1ADQ8N9N8 165 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 MSLNLQ96KJ4 702 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 PPM1MQ96MI6 270 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 PNPOQ9NVS9 261 aa16.8■□□□□ 0.28
CACNA1A-253ENST00000637927 LAMP2P13473 410 aa16.79■□□□□ 0.28
CACNA1A-253ENST00000637927 TAS2R40P59535 323 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms