RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 RSPH1Q8WYR4 309 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 P2RX5Q93086 422 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 MRPL38Q96DV4 380 aaKnown RBP3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 MARK4Q96L34 752 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 YME1L1Q96TA2 773 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 JPH2Q9BR39 696 aaPredicted RBP3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 LLPHQ9BRT6 129 aaKnown RBP3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 UNC45AQ9H3U1 944 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 RGS18Q9NS28 235 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 SPATS2LQ9NUQ6 558 aaKnown RBP3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 THEGQ9P2T0 379 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 IL36RNQ9UBH0 155 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 DDX25Q9UHL0 483 aaKnown RBP3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 PADI3Q9ULW8 664 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 MYO6Q9UM54 1294 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 PCDHGB5Q9Y5G0 923 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 SRPRBQ9Y5M8 271 aaKnown RBP3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 PDCD11Q14690 1871 aaKnown RBP3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 MYO10Q9HD67 2058 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 MUC3AQ02505 3323 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 MYH15Q9Y2K3 1946 aa3.72□□□□□ -1.81
CKS1BP3-201ENST00000600888 ADGRA3Q8IWK6 1321 aa3.71□□□□□ -1.81
CKS1BP3-201ENST00000600888 SPTBN5Q9NRC6 3674 aaKnown RBP3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 PABPN1LA6NDY0 278 aaKnown RBP3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 ASAP2O43150 1006 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 SLC37A4O43826 429 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 RPS6KA5O75582 802 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 SOX30O94993 753 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 LYPLA2O95372 231 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 BAG4O95429 457 aaKnown RBP3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 URODP06132 367 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 DARSP14868 501 aaKnown RBP3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 NAGAP17050 411 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 CD52P31358 61 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 CCKARP32238 428 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 KRT2P35908 639 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 QARSP47897 775 aaKnown RBP3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 GPC3P51654 580 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 CDH15P55291 814 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 MRPS5P82675 430 aaKnown RBP3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 HMGN5P82970 282 aaKnown RBP3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 PRKCEQ02156 737 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 CYP4A11Q02928 519 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 FAM27E3Q08E93 113 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 ST3GAL1Q11201 340 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 CAPSQ13938 189 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 UGCGQ16739 394 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 LETM2Q2VYF4 491 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 ZNF766Q5HY98 468 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 NAA35Q5VZE5 725 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 SLC22A25Q6T423 547 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 SLC24A5Q71RS6 500 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 ANO5Q75V66 913 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 MIER3Q7Z3K6 550 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 TMCO2Q7Z6W1 182 aaPredicted RBP3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 PATL1Q86TB9 770 aaKnown RBP3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 ZNF410Q86VK4 478 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 FAM228AQ86W67 206 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 TMTC1Q8IUR5 882 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 FBXL14Q8N1E6 418 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 IQCF1Q8N6M8 205 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 PLD5Q8N7P1 536 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 ZCCHC10Q8TBK6 192 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 NEK9Q8TD19 979 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 GPT2Q8TD30 523 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 HTRA1Q92743 480 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 MIB2Q96AX9 1013 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 RNF183Q96D59 192 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 ZBTB10Q96DT7 871 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 MAP7D2Q96T17 732 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 ZPBPQ9BS86 351 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 TMEM204Q9BSN7 226 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 FUZQ9BT04 418 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 MSTO1Q9BUK6 570 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 INTS2Q9H0H0 1204 aaKnown RBP3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 FAM49AQ9H0Q0 323 aaPredicted RBP3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 CDT1Q9H211 546 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 HIPK2Q9H2X6 1198 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 DHX33Q9H6R0 707 aaKnown RBP3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 BEX4Q9NWD9 120 aaPredicted RBP3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 TMEM161AQ9NX61 479 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 IL1RAPL1Q9NZN1 696 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 PEMTQ9UBM1 199 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 SLC13A4Q9UKG4 626 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 KCNJ14Q9UNX9 436 aa3.71□□□□□ -1.82
CKS1BP3-201ENST00000600888 IGKV2D-30A0A075B6S6 120 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 A0A0U1RQF3 1178 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 GAGE10A6NGK3 116 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 CBY3A6NI87 242 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 BTBD18B2RXH4 712 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 EBAG9O00559 213 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 CHMP2AO43633 222 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 ITM2AO43736 263 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 SLITRK3O94933 977 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 VTNP04004 478 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 NGFRP08138 427 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 HNRNPA1P09651 372 aaKnown RBP eCLIP3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 MUTP22033 750 aa3.7□□□□□ -1.82
CKS1BP3-201ENST00000600888 U2AF2P26368 475 aaKnown RBP eCLIP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms