RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 WASH6PQ9NQA3 447 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 ANKMY1Q9P2S6 941 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 SHOC2Q9UQ13 582 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 ZNF711Q9Y462 761 aa17.23■□□□□ 0.35
SHKBP1-203ENST00000594298 ZFC3H1O60293 1989 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 CLEC18AA5D8T8 446 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 VEGFDO43915 354 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 FGGP02679 453 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 ZNF28P17035 718 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 ZNF7P17097 686 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 TYRP1P17643 537 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 AMD1P17707 334 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 PSMB4P28070 264 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 CCNG2Q16589 344 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 LONRF2Q1L5Z9 754 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 INSCQ1MX18 579 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 LACTB2Q53H82 288 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 SIRPB2Q5JXA9 342 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 ATP1A1-AS1Q5TC04 95 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 AGAP9Q5VTM2 703 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 ZDHHC20Q5W0Z9 365 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 C16orf46Q6P387 395 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 C6orf15Q6UXA7 325 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 CLEC18BQ6UXF7 455 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 PRSS42Q7Z5A4 293 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 LRRTM4Q86VH4 590 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 ZNF547Q8IVP9 402 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 TRIM48Q8IWZ4 208 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 RBM12BQ8IXT5 1001 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 CLEC18CQ8NCF0 446 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 TGM7Q96PF1 710 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 SLC40A1Q9NP59 571 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 TRMT1Q9NXH9 659 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 FEZ2Q9UHY8 353 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 PCDHB3Q9Y5E6 796 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 MRPS18BQ9Y676 258 aaKnown RBP17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 KCNMB2Q9Y691 235 aa17.22■□□□□ 0.35
SHKBP1-203ENST00000594298 AGTP01019 485 aa17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 PIRTP0C851 137 aa17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 BRAFP15056 766 aa17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 DLSTP36957 453 aa17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 CAPZBP47756 277 aa17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 LEPRP48357 1165 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 IGFBP7Q16270 282 aa17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 DRICH1Q6PGQ1 229 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 C1orf54Q8WWF1 131 aa17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 ATG4AQ8WYN0 398 aa17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 KLHL6Q8WZ60 621 aa17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 VPS35Q96QK1 796 aa17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 OR6C1Q96RD1 312 aa17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 NAP1L3Q99457 506 aaPredicted RBP17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 FICDQ9BVA6 458 aa17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 RAB33BQ9H082 229 aa17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 EPHA6Q9UF33 1036 aa17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 CROTQ9UKG9 612 aa17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 DRG1Q9Y295 367 aaKnown RBP17.21■□□□□ 0.35
SHKBP1-203ENST00000594298 PDZK1P1A8MUH7 402 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 CDK14O94921 469 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 RECKO95980 971 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 FGF5P12034 268 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 BPIP17213 487 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 HMGCLP35914 325 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 SH3BP2P78314 561 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 KLRB1Q12918 225 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 OASLQ15646 514 aaKnown RBP17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 PLA2G4EQ3MJ16 856 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 CYB5D1Q6P9G0 228 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 RANBP10Q6VN20 620 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 CCDC89Q8N998 374 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 GALNT6Q8NCL4 622 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 BLOC1S5Q8TDH9 187 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 STAMBPL1Q96FJ0 436 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 ZDHHC12Q96GR4 267 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 TBL1YQ9BQ87 522 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 LRRC40Q9H9A6 602 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 KCND3Q9UK17 655 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 DNAJC16Q9Y2G8 782 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 PCDHGA6Q9Y5G7 932 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 SPO11Q9Y5K1 396 aa17.2■□□□□ 0.34
SHKBP1-203ENST00000594298 C2orf81A6NN90 581 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 MTX2O75431 263 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 RASSF9O75901 435 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 KIAA0754O94854 1291 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 IFNB1P01574 187 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 SLC4A1P02730 911 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 IDSP22304 550 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 CXCR5P32302 372 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 ADRA1AP35348 466 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 FDFT1P37268 417 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 CHRNA4P43681 627 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 SEPHS1P49903 392 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 PDE1BQ01064 536 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 SNX1Q13596 522 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 GPR18Q14330 331 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 SEPT7Q16181 437 aaKnown RBP17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 KHDC1Q4VXA5 237 aaKnown RBP17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 TCTN3Q6NUS6 607 aa17.19■□□□□ 0.34
SHKBP1-203ENST00000594298 C4orf22Q6V702 233 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms