RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 DOCK4Q8N1I0 1966 aa4.84□□□□□ -1.64
ERCC1-216ENST00000592444 SACSQ9NZJ4 4579 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 TRAV17A0A0B4J275 112 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 KIAA0391O15091 583 aaKnown RBP4.83□□□□□ -1.64
ERCC1-216ENST00000592444 SMAD6O43541 496 aaKnown RBP4.83□□□□□ -1.64
ERCC1-216ENST00000592444 LDB2O43679 373 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 CPNE3O75131 537 aaKnown RBP4.83□□□□□ -1.64
ERCC1-216ENST00000592444 ALOX12BO75342 701 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 RASSF9O75901 435 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 ENDOD1O94919 500 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 TSPAN12O95859 305 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 CST3P01034 146 aaPredicted RBP4.83□□□□□ -1.64
ERCC1-216ENST00000592444 PCCBP05166 539 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 KLK3P07288 261 aaPredicted RBP4.83□□□□□ -1.64
ERCC1-216ENST00000592444 CAPN1P07384 714 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 RRM1P23921 792 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 PON1P27169 355 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 ABCD1P33897 745 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 ADMP35318 185 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 FASLGP48023 281 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 FMO5P49326 533 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 PLK1P53350 603 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 NR1H2P55055 460 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 GSTM4Q03013 218 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 LRMPQ12912 555 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 AIMP2Q13155 320 aaKnown RBP4.83□□□□□ -1.64
ERCC1-216ENST00000592444 NFATC2Q13469 925 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 TNK1Q13470 666 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 TUBB3Q13509 450 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 STIM1Q13586 685 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 SNRNP35Q16560 246 aaKnown RBP4.83□□□□□ -1.64
ERCC1-216ENST00000592444 MYLK3Q32MK0 819 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 VWA3BQ502W6 1294 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 MS4A13Q5J8X5 152 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 LRRC73Q5JTD7 316 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 SLFN12LQ6IEE8 588 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 DPY19L3Q6ZPD9 716 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 PPP1R32Q7Z5V6 425 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 ZAR1Q86SH2 424 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 EID3Q8N140 333 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 ARHGAP18Q8N392 663 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 XXYLT1Q8NBI6 393 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 GOLGA5Q8TBA6 731 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 CXorf40AQ8TE69 158 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 SLC37A2Q8TED4 501 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 THAP3Q8WTV1 239 aaPredicted RBP4.83□□□□□ -1.64
ERCC1-216ENST00000592444 SEMA4DQ92854 862 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 KREMEN1Q96MU8 473 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 TGM7Q96PF1 710 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 PIP5K1AQ99755 562 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 MAP3K3Q99759 626 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 WRAP53Q9BUR4 548 aaKnown RBP4.83□□□□□ -1.64
ERCC1-216ENST00000592444 YIPF2Q9BWQ6 316 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 L2HGDHQ9H9P8 463 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 CARS2Q9HA77 564 aaKnown RBP4.83□□□□□ -1.64
ERCC1-216ENST00000592444 IMPACTQ9P2X3 320 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 HECAQ9UBI9 543 aaPredicted RBP4.83□□□□□ -1.64
ERCC1-216ENST00000592444 FOXD3Q9UJU5 478 aaPredicted RBP4.83□□□□□ -1.64
ERCC1-216ENST00000592444 CNTN6Q9UQ52 1028 aa4.83□□□□□ -1.64
ERCC1-216ENST00000592444 REXO2Q9Y3B8 237 aaKnown RBP4.83□□□□□ -1.64
ERCC1-216ENST00000592444 PRSS38A1L453 326 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 C16orf96A6NNT2 1141 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 BECN2A8MW95 431 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 FAM227AF5H4B4 570 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 CACNB4O00305 520 aaPredicted RBP4.82□□□□□ -1.64
ERCC1-216ENST00000592444 PRRG2O14669 202 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 TNFRSF10CO14798 259 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 P4HA2O15460 535 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 SCRG1O75711 98 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 ZRANB2O95218 330 aaKnown RBP eCLIP4.82□□□□□ -1.64
ERCC1-216ENST00000592444 LCA5LO95447 670 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 GNA14O95837 355 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 TNNC2P02585 160 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 C9P02748 559 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 KRT18P05783 430 aaKnown RBP4.82□□□□□ -1.64
ERCC1-216ENST00000592444 FOLR1P15328 257 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 ITIH2P19823 946 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 PSMC2P35998 433 aaKnown RBP4.82□□□□□ -1.64
ERCC1-216ENST00000592444 PRKCIP41743 596 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 CYP2J2P51589 502 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 UBASH3AP57075 661 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 KIAA1024LP59773 190 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 ARG2P78540 354 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 CDK17Q00537 523 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 CAPRIN1Q14444 709 aaKnown RBP4.82□□□□□ -1.64
ERCC1-216ENST00000592444 SSPNQ14714 243 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 DAZAP2Q15038 168 aaPredicted RBP4.82□□□□□ -1.64
ERCC1-216ENST00000592444 PLEKHS1Q5SXH7 462 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.82□□□□□ -1.64
ERCC1-216ENST00000592444 IRAK1BP1Q5VVH5 260 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 CYB5D1Q6P9G0 228 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 TRIM65Q6PJ69 517 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 FAM198BQ6UWH4 519 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 INTS8Q75QN2 995 aaKnown RBP4.82□□□□□ -1.64
ERCC1-216ENST00000592444 PAQR7Q86WK9 346 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 CIR1Q86X95 450 aaPredicted RBP4.82□□□□□ -1.64
ERCC1-216ENST00000592444 UNC45BQ8IWX7 931 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 LGI2Q8N0V4 545 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 GPD1LQ8N335 351 aa4.82□□□□□ -1.64
ERCC1-216ENST00000592444 PLA2G15Q8NCC3 412 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms